Project measure / variable:   Loos2   short_arrest_num_LT

ID, description, units MPD:54064   short_arrest_num_LT   cumulative number of short arrests, over 3 days of testing, log10 transformed   [log(n)]  during light phase  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
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  STRAIN COMPARISON PLOT
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Loos2 - cumulative number of short arrests, over 3 days of testing, log10 transformed during light phase



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means2.83   log(n)
Median of the strain means2.80   log(n)
SD of the strain means± 0.273
Coefficient of variation (CV)0.0966
Min–max range of strain means2.32   –   3.32   log(n)
Mean sample size per strain35.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 25.326 2.5326 31.2224 < 0.0001
Residuals 426 34.555 0.0811


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 2.72 0.369   59 0.0481 0.136 1.72, 3.38 -0.4
A/J m 2.6 0.384   43 0.0586 0.147 0.888, 3.24 -0.84
BALB/cByJ m 2.99 0.276   44 0.0416 0.0923 2.47, 3.42 0.59
C3H/HeJ m 2.73 0.16   29 0.0298 0.0587 2.33, 3.06 -0.37
C57BL/6J m 2.8 0.204   107 0.0197 0.0729 2.27, 3.26 -0.11
CAST/EiJ m 3.17 0.127   14 0.034 0.0401 3.0, 3.39 1.24
DBA/2J m 2.32 0.381   39 0.061 0.164 1.4, 3.06 -1.87
FVB/NJ m 3.32 0.156   36 0.026 0.047 3.03, 3.75 1.79
NOD/ShiLtJ m 2.96 0.306   37 0.0503 0.103 2.35, 3.57 0.48
PWK/PhJ m 2.8 0.165   15 0.0426 0.0591 2.57, 3.14 -0.11
WSB/EiJ m 2.72 0.366   14 0.0978 0.135 1.99, 3.41 -0.4


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 2.7227 0.0371 2.7956 2.6499
A/J m 2.6046 0.0434 2.6899 2.5192
BALB/cByJ m 2.9888 0.0429 3.0732 2.9044
C3H/HeJ m 2.729 0.0529 2.833 2.625
C57BL/6J m 2.7967 0.0275 2.8508 2.7426
CAST/EiJ m 3.1669 0.0761 3.3165 3.0173
DBA/2J m 2.3243 0.0456 2.414 2.2347
FVB/NJ m 3.3232 0.0475 3.4165 3.2299
NOD/ShiLtJ m 2.9636 0.0468 3.0556 2.8715
PWK/PhJ m 2.7951 0.0735 2.9397 2.6506
WSB/EiJ m 2.7211 0.0761 2.8707 2.5715




  GWAS USING LINEAR MIXED MODELS