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Project measure / variable:   Loos2   long_arrest_dur_mean_LT

ID, description, units MPD:54061   long_arrest_dur_mean_LT   mean duration per long arrest, over 3 days of testing, log10 transformed   [log(s)]  during light phase  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
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  STRAIN COMPARISON PLOT
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Loos2 - mean duration per long arrest, over 3 days of testing, log10 transformed during light phase



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means1.43   log(s)
Median of the strain means1.47   log(s)
SD of the strain means± 0.227
Coefficient of variation (CV)0.159
Min–max range of strain means1.12   –   1.88   log(s)
Mean sample size per strain33.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 18.0953 1.8095 60.8688 < 0.0001
Residuals 414 12.3075 0.0297


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 1.55 0.236   57 0.0313 0.153 1.03, 2.72 0.53
A/J m 1.26 0.171   41 0.0268 0.136 0.898, 1.87 -0.75
BALB/cByJ m 1.12 0.109   44 0.0164 0.0973 0.911, 1.33 -1.36
C3H/HeJ m 1.88 0.135   29 0.0251 0.0719 1.51, 2.17 1.99
C57BL/6J m 1.47 0.158   107 0.0153 0.108 1.14, 2.25 0.18
CAST/EiJ m 1.5 0.152   14 0.0406 0.101 1.16, 1.69 0.31
DBA/2J m 1.65 0.193   32 0.0341 0.117 1.32, 2.06 0.97
FVB/NJ m 1.2 0.0888   36 0.0148 0.0742 0.926, 1.37 -1.01
NOD/ShiLtJ m 1.2 0.185   37 0.0305 0.155 0.937, 1.75 -1.01
PWK/PhJ m 1.52 0.271   15 0.07 0.179 1.3, 2.43 0.4
WSB/EiJ m 1.37 0.164   13 0.0456 0.12 1.05, 1.58 -0.26


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 1.5465 0.0228 1.5914 1.5017
A/J m 1.2559 0.0269 1.3089 1.203
BALB/cByJ m 1.1188 0.026 1.1699 1.0677
C3H/HeJ m 1.8809 0.032 1.9438 1.8179
C57BL/6J m 1.4699 0.0167 1.5027 1.4372
CAST/EiJ m 1.5043 0.0461 1.5949 1.4137
DBA/2J m 1.6532 0.0305 1.7131 1.5932
FVB/NJ m 1.1964 0.0287 1.2529 1.1399
NOD/ShiLtJ m 1.1961 0.0283 1.2518 1.1404
PWK/PhJ m 1.5159 0.0445 1.6034 1.4284
WSB/EiJ m 1.3705 0.0478 1.4645 1.2765




  GWAS USING LINEAR MIXED MODELS