Project measure / variable:   Loos2   long_arrest_dur_mean_DK

ID, description, units MPD:54058   long_arrest_dur_mean_DK   mean duration per long arrest, over 3 days of testing, log10 transformed   [log(s)]  during dark phase  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
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  STRAIN COMPARISON PLOT
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Loos2 - mean duration per long arrest, over 3 days of testing, log10 transformed during dark phase



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means1.42   log(s)
Median of the strain means1.43   log(s)
SD of the strain means± 0.264
Coefficient of variation (CV)0.186
Min–max range of strain means1.03   –   1.93   log(s)
Mean sample size per strain35.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 23.2049 2.3205 158.6804 < 0.0001
Residuals 426 6.2297 0.0146


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 1.5 0.148   59 0.0193 0.0991 1.2, 1.81 0.31
A/J m 1.24 0.0821   43 0.0125 0.0664 1.08, 1.43 -0.68
BALB/cByJ m 1.03 0.0753   44 0.0114 0.073 0.894, 1.19 -1.47
C3H/HeJ m 1.93 0.142   29 0.0263 0.0733 1.68, 2.2 1.93
C57BL/6J m 1.39 0.0856   107 0.00827 0.0614 1.19, 1.59 -0.11
CAST/EiJ m 1.45 0.137   14 0.0366 0.0946 1.17, 1.76 0.12
DBA/2J m 1.62 0.121   39 0.0194 0.0747 1.39, 1.97 0.76
FVB/NJ m 1.2 0.136   36 0.0227 0.114 0.947, 1.71 -0.83
NOD/ShiLtJ m 1.13 0.165   37 0.0271 0.145 0.897, 1.52 -1.09
PWK/PhJ m 1.69 0.155   15 0.0399 0.0913 1.39, 1.97 1.03
WSB/EiJ m 1.43 0.159   14 0.0424 0.111 1.11, 1.66 0.04


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 1.4956 0.0157 1.5266 1.4647
A/J m 1.2366 0.0184 1.2728 1.2003
BALB/cByJ m 1.0324 0.0182 1.0683 0.9966
C3H/HeJ m 1.933 0.0225 1.9771 1.8888
C57BL/6J m 1.3948 0.0117 1.4178 1.3718
CAST/EiJ m 1.4466 0.0323 1.5101 1.383
DBA/2J m 1.624 0.0194 1.6621 1.586
FVB/NJ m 1.1985 0.0202 1.2381 1.1589
NOD/ShiLtJ m 1.1326 0.0199 1.1717 1.0936
PWK/PhJ m 1.6937 0.0312 1.755 1.6323
WSB/EiJ m 1.4325 0.0323 1.496 1.369




  GWAS USING LINEAR MIXED MODELS