Phenotype measure:   Loos2   long_arrest_dur_LT

ID, description, units MPD:54057   long_arrest_dur_LT   long arrest, duration   [s]
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
Ontology mappings


  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Loos2 - long arrest, duration



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means2974   s
Median of the strain means2407   s
SD of the strain means± 1709
Coefficient of variation (CV)0.575
Min–max range of strain means1225   –   7171   s
Mean sample size per strain35.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 630209424.0918 63020942.4092 24.9636 < 0.0001
Residuals 426 1075444010.8076 2524516.4573


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 2196.0 1891.0   59 246.0 0.861 567.0, 12982.0 -0.46
A/J m 1225.0 1281.0   43 195.0 1.05 0.0, 7315.0 -1.02
BALB/cByJ m 2284.0 950.0   44 143.0 0.416 821.0, 4664.0 -0.4
C3H/HeJ m 4769.0 2351.0   29 437.0 0.493 2014.0, 12982.0 1.05
C57BL/6J m 2784.0 1458.0   107 141.0 0.524 911.0, 12034.0 -0.11
CAST/EiJ m 7171.0 2284.0   14 610.0 0.318 4442.0, 12090.0 2.46
DBA/2J m 1425.0 1169.0   39 187.0 0.82 0.0, 6148.0 -0.91
FVB/NJ m 3720.0 1079.0   36 180.0 0.29 1994.0, 6486.0 0.44
NOD/ShiLtJ m 2407.0 1412.0   37 232.0 0.587 812.0, 6836.0 -0.33
PWK/PhJ m 2671.0 2917.0   15 753.0 1.09 957.0, 12777.0 -0.18
WSB/EiJ m 2064.0 1486.0   14 397.0 0.72 243.0, 6517.0 -0.53


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 2195.9254 206.8536 2602.5062 1789.3447
A/J m 1224.9163 242.3008 1701.1702 748.6623
BALB/cByJ m 2284.4341 239.5316 2755.245 1813.6232
C3H/HeJ m 4769.2897 295.0463 5349.2173 4189.362
C57BL/6J m 2784.3907 153.6021 3086.303 2482.4783
CAST/EiJ m 7171.0214 424.6441 8005.6799 6336.363
DBA/2J m 1425.2759 254.4233 1925.3571 925.1947
FVB/NJ m 3719.5389 264.8121 4240.0399 3199.0379
NOD/ShiLtJ m 2407.4 261.2091 2920.819 1893.981
PWK/PhJ m 2671.2867 410.2452 3477.6434 1864.93
WSB/EiJ m 2063.5071 424.6441 2898.1656 1228.8487




  GENOME-WIDE ASSOCIATION (GWAS) VIEW
Plot generated with pyLMM using 132K SNP array. Click on plot to view at larger size.