Project measure / variable:   Loos2   long_arrest_num_LT

ID, description, units MPD:54055   long_arrest_num_LT   cumulative number of long arrests, over 3 days of testing, log10 transformed   [log(n)]  during light phase  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
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  STRAIN COMPARISON PLOT
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Loos2 - cumulative number of long arrests, over 3 days of testing, log10 transformed during light phase



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means1.94   log(n)
Median of the strain means1.86   log(n)
SD of the strain means± 0.316
Coefficient of variation (CV)0.163
Min–max range of strain means1.38   –   2.39   log(n)
Mean sample size per strain35.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 34.6944 3.4694 44.2104 < 0.0001
Residuals 426 33.4307 0.0785


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 1.71 0.319   59 0.0415 0.186 0.945, 2.47 -0.72
A/J m 1.67 0.406   43 0.0618 0.242 -0.84
BALB/cByJ m 2.24 0.235   44 0.0355 0.105 1.72, 2.74 0.96
C3H/HeJ m 1.77 0.159   29 0.0296 0.0899 1.47, 2.04 -0.53
C57BL/6J m 1.96 0.205   107 0.0198 0.105 1.3, 2.44 0.07
CAST/EiJ m 2.35 0.126   14 0.0337 0.0536 2.16, 2.52 1.31
DBA/2J m 1.38 0.42   39 0.0673 0.305 -1.76
FVB/NJ m 2.39 0.151   36 0.0251 0.0631 2.12, 2.81 1.43
NOD/ShiLtJ m 2.16 0.282   37 0.0463 0.131 1.69, 2.88 0.71
PWK/PhJ m 1.81 0.201   15 0.0518 0.111 1.46, 2.19 -0.4
WSB/EiJ m 1.86 0.387   14 0.103 0.208 0.869, 2.53 -0.24


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 1.7122 0.0365 1.7839 1.6405
A/J m 1.6728 0.0427 1.7567 1.5888
BALB/cByJ m 2.2399 0.0422 2.3229 2.1569
C3H/HeJ m 1.7708 0.052 1.873 1.6685
C57BL/6J m 1.9554 0.0271 2.0086 1.9022
CAST/EiJ m 2.3506 0.0749 2.4978 2.2035
DBA/2J m 1.3784 0.0449 1.4666 1.2903
FVB/NJ m 2.3892 0.0467 2.4809 2.2974
NOD/ShiLtJ m 2.1566 0.0461 2.2471 2.0661
PWK/PhJ m 1.8149 0.0723 1.957 1.6727
WSB/EiJ m 1.8642 0.0749 2.0113 1.717




  GWAS USING LINEAR MIXED MODELS