Project measure / variable:   Loos2   long_arrest_num_DK

ID, description, units MPD:54054   long_arrest_num_DK   cumulative number of long arrests, over 3 days of testing, log10 transformed   [log(n)]  during dark phase  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Loos2 - cumulative number of long arrests, over 3 days of testing, log10 transformed during dark phase



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means2.66   log(n)
Median of the strain means2.66   log(n)
SD of the strain means± 0.199
Coefficient of variation (CV)0.0748
Min–max range of strain means2.25   –   2.99   log(n)
Mean sample size per strain35.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 15.2069 1.5207 118.6359 < 0.0001
Residuals 426 5.4605 0.0128


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 2.47 0.123   59 0.016 0.0499 2.19, 2.75 -0.93
A/J m 2.86 0.121   43 0.0185 0.0424 2.57, 3.05 1.03
BALB/cByJ m 2.99 0.0881   44 0.0133 0.0295 2.73, 3.2 1.68
C3H/HeJ m 2.25 0.111   29 0.0207 0.0495 2.05, 2.53 -2.04
C57BL/6J m 2.67 0.0906   107 0.00876 0.034 2.44, 2.86 0.07
CAST/EiJ m 2.66 0.132   14 0.0352 0.0495 2.5, 2.85 0.02
DBA/2J m 2.57 0.0923   39 0.0148 0.0359 2.32, 2.87 -0.43
FVB/NJ m 2.59 0.169   36 0.0281 0.0652 2.14, 2.86 -0.33
NOD/ShiLtJ m 2.83 0.123   37 0.0202 0.0434 2.45, 3.08 0.88
PWK/PhJ m 2.66 0.117   15 0.0302 0.044 2.44, 2.92 0.02
WSB/EiJ m 2.66 0.103   14 0.0274 0.0385 2.48, 2.83 0.02


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 2.4651 0.0147 2.4941 2.4362
A/J m 2.8595 0.0173 2.8934 2.8256
BALB/cByJ m 2.9912 0.0171 3.0248 2.9577
C3H/HeJ m 2.2482 0.021 2.2896 2.2069
C57BL/6J m 2.6655 0.0109 2.687 2.6439
CAST/EiJ m 2.6644 0.0303 2.7238 2.6049
DBA/2J m 2.5739 0.0181 2.6095 2.5383
FVB/NJ m 2.5867 0.0189 2.6238 2.5496
NOD/ShiLtJ m 2.8265 0.0186 2.8631 2.79
PWK/PhJ m 2.6612 0.0292 2.7187 2.6037
WSB/EiJ m 2.6636 0.0303 2.7231 2.6042




  GWAS USING LINEAR MIXED MODELS