Project measure / variable:   Loos2   short_move_dist_DK

ID, description, units MPD:54052   short_move_dist_DK   cumulative short movement distance, over 3 days of testing, log10 transformed   [log(cm)]  during dark phase  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
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  STRAIN COMPARISON PLOT
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Loos2 - cumulative short movement distance, over 3 days of testing, log10 transformed during dark phase

NOD/ShiLtJBALB/cByJA/JC57BL/6JWSB/EiJFVB/NJCAST/EiJPWK/PhJDBA/2J129S1/SvImJC3H/HeJ log(cm) 2.83.03.23.43.63.84.04.2femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means3.45   log(cm)
Median of the strain means3.43   log(cm)
SD of the strain means± 0.283
Coefficient of variation (CV)0.0820
Min–max range of strain means2.96   –   3.91   log(cm)
Mean sample size per strain35.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 31.2053 3.1205 125.695 < 0.0001
Residuals 426 10.576 0.0248


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 11 (11)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ m 3.16 0.157   59 0.0205 0.0497 2.79, 3.43 -1.04
A/J m 3.59 0.17   43 0.0259 0.0472 3.24, 4.12 0.48
BALB/cByJ m 3.87 0.108   44 0.0162 0.0278 3.54, 4.06 1.47
C3H/HeJ m 2.96 0.119   29 0.0222 0.0403 2.72, 3.19 -1.75
C57BL/6J m 3.58 0.148   107 0.0143 0.0413 3.27, 3.97 0.44
CAST/EiJ m 3.42 0.176   14 0.047 0.0514 3.17, 3.76 -0.12
DBA/2J m 3.26 0.0988   39 0.0158 0.0303 3.04, 3.46 -0.69
FVB/NJ m 3.43 0.203   36 0.0338 0.0591 3.01, 3.77 -0.09
NOD/ShiLtJ m 3.91 0.231   37 0.0379 0.059 3.23, 4.29 1.61
PWK/PhJ m 3.33 0.134   15 0.0345 0.0401 3.1, 3.56 -0.44
WSB/EiJ m 3.49 0.163   14 0.0436 0.0468 3.18, 3.7 0.13


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 3.1637 0.0205 3.204 3.1234
A/J m 3.5935 0.024 3.6407 3.5463
BALB/cByJ m 3.8674 0.0238 3.9141 3.8207
C3H/HeJ m 2.9607 0.0293 3.0182 2.9032
C57BL/6J m 3.5788 0.0152 3.6087 3.5488
CAST/EiJ m 3.4221 0.0421 3.5049 3.3394
DBA/2J m 3.2614 0.0252 3.311 3.2118
FVB/NJ m 3.4308 0.0263 3.4824 3.3792
NOD/ShiLtJ m 3.9135 0.0259 3.9644 3.8626
PWK/PhJ m 3.3309 0.0407 3.4109 3.251
WSB/EiJ m 3.4881 0.0421 3.5709 3.4054




  GWAS USING LINEAR MIXED MODELS

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