Project measure / variable:   Loos2   short_move_num_LT

ID, description, units MPD:54051   short_move_num_LT   cumulative short movement number, over 3 days of testing, log10 transformed   [log(n)]  during light phase  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
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  STRAIN COMPARISON PLOT
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Loos2 - cumulative short movement number, over 3 days of testing, log10 transformed during light phase



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means2.67   log(n)
Median of the strain means2.60   log(n)
SD of the strain means± 0.273
Coefficient of variation (CV)0.102
Min–max range of strain means2.19   –   3.14   log(n)
Mean sample size per strain35.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 26.2969 2.6297 32.5083 < 0.0001
Residuals 426 34.4604 0.0809


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 2.5 0.358   59 0.0467 0.143 1.58, 3.08 -0.61
A/J m 2.46 0.366   43 0.0559 0.149 0.735, 2.99 -0.76
BALB/cByJ m 2.9 0.274   44 0.0413 0.0946 2.37, 3.36 0.86
C3H/HeJ m 2.54 0.177   29 0.0328 0.0696 2.09, 2.92 -0.46
C57BL/6J m 2.67 0.202   107 0.0196 0.0758 2.19, 3.12 0.01
CAST/EiJ m 2.96 0.131   14 0.035 0.0442 2.79, 3.16 1.08
DBA/2J m 2.19 0.393   39 0.063 0.18 1.08, 2.98 -1.75
FVB/NJ m 3.14 0.17   36 0.0284 0.0541 2.89, 3.53 1.74
NOD/ShiLtJ m 2.86 0.324   37 0.0532 0.113 2.18, 3.53 0.71
PWK/PhJ m 2.6 0.165   15 0.0426 0.0634 2.36, 2.94 -0.24
WSB/EiJ m 2.51 0.359   14 0.0958 0.143 1.77, 3.16 -0.57


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 2.5007 0.037 2.5735 2.4279
A/J m 2.4641 0.0434 2.5493 2.3788
BALB/cByJ m 2.8959 0.0429 2.9802 2.8116
C3H/HeJ m 2.5386 0.0528 2.6424 2.4348
C57BL/6J m 2.669 0.0275 2.723 2.6149
CAST/EiJ m 2.9608 0.076 3.1102 2.8114
DBA/2J m 2.1856 0.0455 2.2751 2.0961
FVB/NJ m 3.1434 0.0474 3.2365 3.0502
NOD/ShiLtJ m 2.8583 0.0468 2.9502 2.7664
PWK/PhJ m 2.6013 0.0734 2.7457 2.457
WSB/EiJ m 2.5095 0.076 2.6589 2.3601




  GWAS USING LINEAR MIXED MODELS