Project measure / variable:   Loos2   short_move_num_DK

ID, description, units MPD:54048   short_move_num_DK   cumulative short movement number, over 3 days of testing, log10 transformed   [log(n)]  during dark phase  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
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  STRAIN COMPARISON PLOT
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Loos2 - cumulative short movement number, over 3 days of testing, log10 transformed during dark phase

BALB/cByJNOD/ShiLtJA/JC57BL/6JWSB/EiJFVB/NJPWK/PhJCAST/EiJDBA/2J129S1/SvImJC3H/HeJ log(n) 2.82.93.03.13.23.33.43.53.63.73.83.94.0femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means3.39   log(n)
Median of the strain means3.36   log(n)
SD of the strain means± 0.216
Coefficient of variation (CV)0.0637
Min–max range of strain means3.00   –   3.75   log(n)
Mean sample size per strain35.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 18.342 1.8342 121.5614 < 0.0001
Residuals 426 6.4278 0.0151


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 11 (11)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ m 3.16 0.137   59 0.0178 0.0434 2.85, 3.47 -1.05
A/J m 3.53 0.13   43 0.0198 0.0369 3.21, 3.84 0.66
BALB/cByJ m 3.75 0.0835   44 0.0126 0.0223 3.54, 3.93 1.68
C3H/HeJ m 3.0 0.101   29 0.0187 0.0335 2.8, 3.22 -1.8
C57BL/6J m 3.45 0.0986   107 0.00953 0.0286 3.23, 3.69 0.29
CAST/EiJ m 3.32 0.157   14 0.0419 0.0472 3.09, 3.58 -0.31
DBA/2J m 3.3 0.0965   39 0.0154 0.0293 3.06, 3.53 -0.4
FVB/NJ m 3.36 0.167   36 0.0278 0.0496 3.04, 3.65 -0.13
NOD/ShiLtJ m 3.69 0.163   37 0.0268 0.0441 3.22, 3.98 1.4
PWK/PhJ m 3.34 0.132   15 0.0341 0.0395 3.06, 3.52 -0.22
WSB/EiJ m 3.36 0.113   14 0.0302 0.0337 3.11, 3.52 -0.13


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 3.1586 0.016 3.19 3.1271
A/J m 3.53 0.0187 3.5668 3.4932
BALB/cByJ m 3.7516 0.0185 3.788 3.7152
C3H/HeJ m 2.9999 0.0228 3.0447 2.955
C57BL/6J m 3.4519 0.0119 3.4752 3.4286
CAST/EiJ m 3.3226 0.0328 3.3871 3.258
DBA/2J m 3.2951 0.0197 3.3337 3.2564
FVB/NJ m 3.3616 0.0205 3.4019 3.3214
NOD/ShiLtJ m 3.6934 0.0202 3.7331 3.6537
PWK/PhJ m 3.3382 0.0317 3.4005 3.2759
WSB/EiJ m 3.3581 0.0328 3.4226 3.2935




  GWAS USING LINEAR MIXED MODELS

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