Phenotype measure:   Loos2   long_move_max_vel

ID, description, units MPD:54046   long_move_max_vel   average velocity of 95th percentile fastest long movement segments, over 3 days of testing, log10 transformed   [log(cm/s)]
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
Ontology mappings


  STRAIN COMPARISON PLOT
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Loos2 - average velocity of 95th percentile fastest long movement segments, over 3 days of testing, log10 transformed



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means1.27   log(cm/s)
Median of the strain means1.28   log(cm/s)
SD of the strain means± 0.0527
Coefficient of variation (CV)0.0414
Min–max range of strain means1.17   –   1.34   log(cm/s)
Mean sample size per strain35.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 1.2444 0.1244 47.1652 < 0.0001
Residuals 426 1.124 0.0026


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 1.28 0.0673   59 0.00876 0.0527 1.09, 1.47 0.16
A/J m 1.17 0.0461   43 0.00703 0.0393 1.04, 1.3 -1.93
BALB/cByJ m 1.28 0.0352   44 0.00531 0.0275 1.19, 1.36 0.16
C3H/HeJ m 1.19 0.063   29 0.0117 0.0528 1.05, 1.36 -1.55
C57BL/6J m 1.34 0.0372   107 0.0036 0.0277 1.24, 1.44 1.29
CAST/EiJ m 1.3 0.0898   14 0.024 0.0689 1.19, 1.5 0.53
DBA/2J m 1.24 0.0416   39 0.00666 0.0335 1.13, 1.34 -0.6
FVB/NJ m 1.27 0.0637   36 0.0106 0.0503 1.19, 1.5 -0.03
NOD/ShiLtJ m 1.29 0.0478   37 0.00785 0.037 1.14, 1.38 0.35
PWK/PhJ m 1.32 0.0402   15 0.0104 0.0304 1.26, 1.39 0.91
WSB/EiJ m 1.31 0.0576   14 0.0154 0.0441 1.23, 1.39 0.72


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 1.2773 0.0067 1.2905 1.2642
A/J m 1.174 0.0078 1.1894 1.1586
BALB/cByJ m 1.2811 0.0077 1.2963 1.2659
C3H/HeJ m 1.1935 0.0095 1.2123 1.1748
C57BL/6J m 1.3436 0.005 1.3533 1.3338
CAST/EiJ m 1.3045 0.0137 1.3315 1.2775
DBA/2J m 1.2437 0.0082 1.2599 1.2275
FVB/NJ m 1.2661 0.0086 1.2829 1.2493
NOD/ShiLtJ m 1.2924 0.0084 1.309 1.2758
PWK/PhJ m 1.3241 0.0133 1.3502 1.2981
WSB/EiJ m 1.3062 0.0137 1.3332 1.2792




  GENOME-WIDE ASSOCIATION (GWAS) STATIC PLOT
Plot generated with EMMA / pyLMM using 132K SNP array. Click on plot to view at larger size.