Project measure / variable:   Loos2   long_move_dist_LT

ID, description, units MPD:54045   long_move_dist_LT   cumulative long movement distance, over 3 days of testing, log10 transformed   [log(cm)]  during light phase  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
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  STRAIN COMPARISON PLOT
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Loos2 - cumulative long movement distance, over 3 days of testing, log10 transformed during light phase



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means3.51   log(cm)
Median of the strain means3.53   log(cm)
SD of the strain means± 0.359
Coefficient of variation (CV)0.102
Min–max range of strain means2.86   –   4.10   log(cm)
Mean sample size per strain35.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 44.687 4.4687 41.4089 < 0.0001
Residuals 426 45.9725 0.1079


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 3.42 0.429   59 0.0559 0.126 2.45, 4.42 -0.25
A/J m 3.04 0.479   43 0.073 0.157 1.11, 3.95 -1.31
BALB/cByJ m 3.61 0.285   44 0.043 0.079 3.07, 4.16 0.28
C3H/HeJ m 3.32 0.155   29 0.0288 0.0467 2.96, 3.63 -0.53
C57BL/6J m 3.5 0.258   107 0.0249 0.0737 2.94, 4.05 -0.03
CAST/EiJ m 3.94 0.133   14 0.0354 0.0336 3.75, 4.17 1.2
DBA/2J m 2.86 0.417   39 0.0667 0.146 1.87, 3.69 -1.81
FVB/NJ m 4.1 0.239   36 0.0399 0.0583 3.71, 4.97 1.65
NOD/ShiLtJ m 3.75 0.295   37 0.0485 0.0787 3.17, 4.37 0.67
PWK/PhJ m 3.53 0.188   15 0.0485 0.0533 3.29, 3.89 0.06
WSB/EiJ m 3.53 0.391   14 0.104 0.111 2.75, 4.39 0.06


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 3.4172 0.0428 3.5013 3.3332
A/J m 3.0443 0.0501 3.1427 2.9458
BALB/cByJ m 3.614 0.0495 3.7114 3.5167
C3H/HeJ m 3.3189 0.061 3.4388 3.199
C57BL/6J m 3.4994 0.0318 3.5618 3.437
CAST/EiJ m 3.9421 0.0878 4.1146 3.7695
DBA/2J m 2.8592 0.0526 2.9625 2.7558
FVB/NJ m 4.1029 0.0548 4.2105 3.9953
NOD/ShiLtJ m 3.7486 0.054 3.8548 3.6425
PWK/PhJ m 3.5295 0.0848 3.6963 3.3628
WSB/EiJ m 3.5269 0.0878 3.6995 3.3544




  GWAS USING LINEAR MIXED MODELS