Project measure / variable:   Loos2   long_move_num_LT

ID, description, units MPD:54043   long_move_num_LT   cumulative long movement number, over 3 days of testing, log10 transformed   [log(n)]  during light phase  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
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  STRAIN COMPARISON PLOT
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Loos2 - cumulative long movement number, over 3 days of testing, log10 transformed during light phase



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means2.42   log(n)
Median of the strain means2.40   log(n)
SD of the strain means± 0.304
Coefficient of variation (CV)0.126
Min–max range of strain means1.86   –   2.95   log(n)
Mean sample size per strain35.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 30.8062 3.0806 33.0273 < 0.0001
Residuals 426 39.7352 0.0933


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 2.37 0.389   59 0.0506 0.164 1.34, 3.12 -0.16
A/J m 2.07 0.442   43 0.0675 0.213 0.34, 2.97 -1.15
BALB/cByJ m 2.48 0.278   44 0.0418 0.112 2.0, 3.04 0.2
C3H/HeJ m 2.38 0.153   29 0.0284 0.0645 2.05, 2.61 -0.13
C57BL/6J m 2.33 0.245   107 0.0237 0.105 1.76, 2.84 -0.29
CAST/EiJ m 2.85 0.147   14 0.0393 0.0515 2.64, 3.11 1.42
DBA/2J m 1.86 0.404   39 0.0648 0.218 0.845, 2.58 -1.84
FVB/NJ m 2.95 0.162   36 0.027 0.0548 2.67, 3.44 1.75
NOD/ShiLtJ m 2.48 0.272   37 0.0448 0.11 1.86, 3.01 0.2
PWK/PhJ m 2.43 0.179   15 0.0461 0.0736 2.17, 2.79 0.04
WSB/EiJ m 2.4 0.381   14 0.102 0.159 1.63, 3.12 -0.06


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 2.3689 0.0398 2.4471 2.2908
A/J m 2.0738 0.0466 2.1654 1.9823
BALB/cByJ m 2.4824 0.046 2.5729 2.3919
C3H/HeJ m 2.3754 0.0567 2.4869 2.2639
C57BL/6J m 2.3337 0.0295 2.3918 2.2757
CAST/EiJ m 2.8541 0.0816 3.0145 2.6936
DBA/2J m 1.8561 0.0489 1.9523 1.76
FVB/NJ m 2.9531 0.0509 3.0532 2.8531
NOD/ShiLtJ m 2.4822 0.0502 2.5809 2.3835
PWK/PhJ m 2.4265 0.0789 2.5815 2.2715
WSB/EiJ m 2.3951 0.0816 2.5555 2.2346




  GWAS USING LINEAR MIXED MODELS