Project measure / variable:   Loos2   long_move_num_DK

ID, description, units MPD:54042   long_move_num_DK   cumulative long movement number, over 3 days of testing, log10 transformed   [log(n)]  during dark phase  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
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  STRAIN COMPARISON PLOT
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Loos2 - cumulative long movement number, over 3 days of testing, log10 transformed during dark phase



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means3.22   log(n)
Median of the strain means3.27   log(n)
SD of the strain means± 0.182
Coefficient of variation (CV)0.0566
Min–max range of strain means2.84   –   3.53   log(n)
Mean sample size per strain35.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 12.6821 1.2682 77.2379 < 0.0001
Residuals 426 6.9947 0.0164


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 3.05 0.177   59 0.0231 0.0581 2.57, 3.44 -0.95
A/J m 3.41 0.094   43 0.0143 0.0276 3.17, 3.62 1.02
BALB/cByJ m 3.53 0.0952   44 0.0144 0.0269 3.33, 3.7 1.68
C3H/HeJ m 2.84 0.113   29 0.021 0.0397 2.51, 3.0 -2.1
C57BL/6J m 3.27 0.111   107 0.0108 0.0341 2.95, 3.51 0.25
CAST/EiJ m 3.28 0.178   14 0.0477 0.0544 2.97, 3.56 0.31
DBA/2J m 3.12 0.0819   39 0.0131 0.0262 2.94, 3.26 -0.57
FVB/NJ m 3.16 0.156   36 0.0261 0.0495 2.86, 3.61 -0.35
NOD/ShiLtJ m 3.24 0.143   37 0.0235 0.0442 2.84, 3.48 0.09
PWK/PhJ m 3.28 0.104   15 0.0268 0.0316 3.11, 3.49 0.31
WSB/EiJ m 3.28 0.159   14 0.0424 0.0484 2.97, 3.53 0.31


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 3.0458 0.0167 3.0786 3.013
A/J m 3.4061 0.0195 3.4445 3.3677
BALB/cByJ m 3.5342 0.0193 3.5721 3.4962
C3H/HeJ m 2.8402 0.0238 2.887 2.7935
C57BL/6J m 3.2668 0.0124 3.2911 3.2424
CAST/EiJ m 3.2789 0.0342 3.3462 3.2115
DBA/2J m 3.1234 0.0205 3.1638 3.0831
FVB/NJ m 3.1585 0.0214 3.2004 3.1165
NOD/ShiLtJ m 3.2362 0.0211 3.2776 3.1948
PWK/PhJ m 3.2789 0.0331 3.344 3.2139
WSB/EiJ m 3.2789 0.0342 3.3462 3.2115




  GWAS USING LINEAR MIXED MODELS