Project measure / variable:   Loos2   onshelter_response_LT

ID, description, units MPD:54041   onshelter_response_LT   change in OnShelter zone duration: response to phase onset, over 3 days of testing    during light phase  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
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  STRAIN COMPARISON PLOT
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Loos2 - change in OnShelter zone duration: response to phase onset, over 3 days of testing during light phase



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means-0.0214   None
Median of the strain means-0.0187   None
SD of the strain means± 0.0329
Coefficient of variation (CV)-1.54
Min–max range of strain means-0.0812   –   0.0199   None
Mean sample size per strain24.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 0.3952 0.0395 9.1265 < 0.0001
Residuals 309 1.338 0.0043


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m -0.0187 0.0495   33 0.00862 -2.65 -0.255, 0.0192 0.08
A/J m -0.0273 0.0571   25 0.0114 -2.1 -0.153, 0.154 -0.18
BALB/cByJ m -0.0812 0.067   23 0.014 -0.825 -0.232, 0.0682 -1.82
C3H/HeJ m 0.00492 0.0545   24 0.0111 11.1 -0.118, 0.125 0.8
C57BL/6J m -0.073 0.0886   90 0.00934 -1.21 -0.362, 0.283 -1.57
CAST/EiJ m -0.0389 0.0576   14 0.0154 -1.48 -0.21, 0.0202 -0.53
DBA/2J m -0.0274 0.0413   19 0.00947 -1.51 -0.116, 0.0366 -0.18
FVB/NJ m -0.00816 0.0596   36 0.00993 -7.3 -0.184, 0.0852 0.4
NOD/ShiLtJ m 0.0199 0.0439   36 0.00731 2.2 -0.0748, 0.164 1.25
PWK/PhJ m 0.00685 0.0563   13 0.0156 8.22 -0.0632, 0.125 0.86
WSB/EiJ m 0.00795 0.045   7 0.017 5.66 -0.0441, 0.073 0.89


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m -0.0187 0.0115 0.0039 -0.0412
A/J m -0.0273 0.0132 -0.0014 -0.0532
BALB/cByJ m -0.0812 0.0137 -0.0542 -0.1082
C3H/HeJ m 0.0049 0.0134 0.0313 -0.0215
C57BL/6J m -0.073 0.0069 -0.0593 -0.0866
CAST/EiJ m -0.0389 0.0176 -0.0043 -0.0735
DBA/2J m -0.0274 0.0151 0.0023 -0.0571
FVB/NJ m -0.0082 0.011 0.0134 -0.0297
NOD/ShiLtJ m 0.0199 0.011 0.0415 -0.0017
PWK/PhJ m 0.0069 0.0183 0.0428 -0.0291
WSB/EiJ m 0.008 0.0249 0.0569 -0.041




  GWAS USING LINEAR MIXED MODELS