Project measure / variable:   Loos2   onshelter_anticipation_LT

ID, description, units MPD:54037   onshelter_anticipation_LT   change in OnShelter zone duration: anticipation of phase change, over 3 days of testing    during light phase  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
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  STRAIN COMPARISON PLOT
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Loos2 - change in OnShelter zone duration: anticipation of phase change, over 3 days of testing during light phase



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means-0.00163   None
Median of the strain means0.000782   None
SD of the strain means± 0.0166
Coefficient of variation (CV)-10.1
Min–max range of strain means-0.0289   –   0.0347   None
Mean sample size per strain33.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 0.0846 0.0085 2.6505 0.0038
Residuals 408 1.3028 0.0032


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m -0.00611 0.0397   58 0.00522 -6.51 -0.237, 0.0729 -0.27
A/J m -0.00937 0.026   42 0.00402 -2.78 -0.0765, 0.034 -0.47
BALB/cByJ m -0.0289 0.0558   40 0.00882 -1.93 -0.168, 0.102 -1.64
C3H/HeJ m 0.00223 0.0417   25 0.00834 18.7 -0.0765, 0.101 0.23
C57BL/6J m 0.00466 0.047   107 0.00454 10.1 -0.143, 0.166 0.38
CAST/EiJ m -0.0232 0.0699   14 0.0187 -3.02 -0.228, 0.101 -1.3
DBA/2J m 0.000782 0.0496   39 0.00795 63.5 -0.117, 0.105 0.15
FVB/NJ m 0.0347 0.136   29 0.0253 3.92 -0.191, 0.358 2.19
NOD/ShiLtJ m 0.00299 0.027   36 0.0045 9.04 -0.0587, 0.079 0.28
PWK/PhJ m 0.00597 0.058   15 0.015 9.71 -0.0368, 0.182 0.46
WSB/EiJ m -0.00173 0.0555   14 0.0148 -32.0 -0.159, 0.0562 -0.01


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m -0.0061 0.0074 0.0085 -0.0207
A/J m -0.0094 0.0087 0.0078 -0.0265
BALB/cByJ m -0.0289 0.0089 -0.0114 -0.0465
C3H/HeJ m 0.0022 0.0113 0.0244 -0.02
C57BL/6J m 0.0047 0.0055 0.0154 -0.0061
CAST/EiJ m -0.0232 0.0151 0.0065 -0.0528
DBA/2J m 0.0008 0.009 0.0186 -0.017
FVB/NJ m 0.0347 0.0105 0.0553 0.0141
NOD/ShiLtJ m 0.003 0.0094 0.0215 -0.0155
PWK/PhJ m 0.006 0.0146 0.0347 -0.0227
WSB/EiJ m -0.0017 0.0151 0.028 -0.0314




  GWAS USING LINEAR MIXED MODELS