Project measure / variable:   Loos2   spout_response_DK

ID, description, units MPD:54028   spout_response_DK   change in Spout zone duration: response to phase onset, over 3 days of testing    during dark phase  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
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  STRAIN COMPARISON PLOT
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Loos2 - change in Spout zone duration: response to phase onset, over 3 days of testing during dark phase



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means0.0200   None
Median of the strain means0.0208   None
SD of the strain means± 0.0227
Coefficient of variation (CV)1.13
Min–max range of strain means-0.0198   –   0.0553   None
Mean sample size per strain31.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 0.1055 0.0106 2.4747 0.007
Residuals 388 1.6548 0.0043


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 0.0386 0.0492   54 0.0067 1.28 -0.0724, 0.196 0.82
A/J m 0.0389 0.124   22 0.0264 3.18 -0.377, 0.216 0.83
BALB/cByJ m 0.0208 0.0279   44 0.00421 1.34 -0.0319, 0.0763 0.03
C3H/HeJ m 0.00882 0.0445   28 0.00842 5.05 -0.0887, 0.151 -0.49
C57BL/6J m 0.0291 0.0591   106 0.00574 2.03 -0.173, 0.19 0.4
CAST/EiJ m -0.00618 0.0398   14 0.0106 -6.44 -0.0823, 0.0805 -1.15
DBA/2J m 0.0398 0.0452   31 0.00811 1.13 -0.0852, 0.186 0.87
FVB/NJ m 0.0122 0.0353   36 0.00589 2.89 -0.076, 0.129 -0.35
NOD/ShiLtJ m 0.003 0.0816   37 0.0134 27.2 -0.417, 0.071 -0.75
PWK/PhJ m 0.0553 0.136   15 0.0352 2.47 -0.119, 0.366 1.55
WSB/EiJ m -0.0198 0.107   12 0.0308 -5.38 -0.307, 0.088 -1.75


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 0.0386 0.0089 0.056 0.0211
A/J m 0.0389 0.0139 0.0663 0.0116
BALB/cByJ m 0.0208 0.0098 0.0402 0.0015
C3H/HeJ m 0.0088 0.0123 0.0331 -0.0154
C57BL/6J m 0.0291 0.0063 0.0416 0.0166
CAST/EiJ m -0.0062 0.0175 0.0281 -0.0405
DBA/2J m 0.0398 0.0117 0.0629 0.0168
FVB/NJ m 0.0122 0.0109 0.0336 -0.0092
NOD/ShiLtJ m 0.003 0.0107 0.0241 -0.0181
PWK/PhJ m 0.0553 0.0169 0.0885 0.0222
WSB/EiJ m -0.0198 0.0189 0.0172 -0.0569




  GWAS USING LINEAR MIXED MODELS