Project measure / variable:   Loos2   spout_anticipation_DK

ID, description, units MPD:54026   spout_anticipation_DK   change in Spout zone duration: anticipation of phase change, over 3 days of testing    during dark phase  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
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  STRAIN COMPARISON PLOT
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Loos2 - change in Spout zone duration: anticipation of phase change, over 3 days of testing during dark phase



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means0.000952   None
Median of the strain means-0.00162   None
SD of the strain means± 0.0220
Coefficient of variation (CV)23.1
Min–max range of strain means-0.0394   –   0.0516   None
Mean sample size per strain30.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 0.0967 0.0097 1.3079 0.2241
Residuals 377 2.7864 0.0074


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m -0.00253 0.0467   51 0.00654 -18.5 -0.131, 0.121 -0.16
A/J m -0.0394 0.143   21 0.0312 -3.62 -0.461, 0.0785 -1.84
BALB/cByJ m 0.000286 0.0248   44 0.00374 86.7 -0.0495, 0.0614 -0.03
C3H/HeJ m -0.00162 0.037   27 0.00713 -22.9 -0.0919, 0.0691 -0.12
C57BL/6J m -0.0104 0.0611   104 0.00599 -5.88 -0.185, 0.242 -0.52
CAST/EiJ m -0.00791 0.0179   14 0.00479 -2.27 -0.0513, 0.0145 -0.4
DBA/2J m 0.015 0.177   27 0.034 11.8 -0.173, 0.875 0.64
FVB/NJ m 0.0127 0.0315   36 0.00525 2.48 -0.0267, 0.114 0.53
NOD/ShiLtJ m 0.000511 0.0985   37 0.0162 193.0 -0.515, 0.223 -0.02
PWK/PhJ m 0.0516 0.18   15 0.0465 3.49 -0.126, 0.662 2.3
WSB/EiJ m -0.00777 0.124   12 0.0357 -15.9 -0.33, 0.126 -0.4


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m -0.0025 0.012 0.0211 -0.0262
A/J m -0.0394 0.0188 -0.0025 -0.0763
BALB/cByJ m 0.0003 0.013 0.0258 -0.0252
C3H/HeJ m -0.0016 0.0165 0.0309 -0.0342
C57BL/6J m -0.0104 0.0084 0.0062 -0.027
CAST/EiJ m -0.0079 0.023 0.0373 -0.0531
DBA/2J m 0.015 0.0165 0.0475 -0.0175
FVB/NJ m 0.0127 0.0143 0.0409 -0.0155
NOD/ShiLtJ m 0.0005 0.0141 0.0283 -0.0273
PWK/PhJ m 0.0516 0.0222 0.0952 0.0079
WSB/EiJ m -0.0078 0.0248 0.041 -0.0566




  GWAS USING LINEAR MIXED MODELS