Project measure / variable:   Loos2   feeding_dur_DK

ID, description, units MPD:54014   feeding_dur_DK   cumulative duration in feeding zone during dark phase, over 3 days of testing, log10 transformed   [log(s)]  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
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  STRAIN COMPARISON PLOT
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Loos2 - cumulative duration in feeding zone during dark phase, over 3 days of testing, log10 transformed



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means3.99   log(s)
Median of the strain means4.03   log(s)
SD of the strain means± 0.120
Coefficient of variation (CV)0.0300
Min–max range of strain means3.78   –   4.13   log(s)
Mean sample size per strain35.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 6.2468 0.6247 35.0517 < 0.0001
Residuals 426 7.592 0.0178


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 3.78 0.154   59 0.0201 0.0409 3.49, 4.19 -1.79
A/J m 4.06 0.13   43 0.0199 0.0321 3.74, 4.33 0.55
BALB/cByJ m 4.03 0.136   44 0.0206 0.0338 3.74, 4.25 0.3
C3H/HeJ m 4.13 0.13   29 0.0242 0.0316 3.8, 4.3 1.13
C57BL/6J m 3.91 0.0863   107 0.00835 0.0221 3.71, 4.16 -0.71
CAST/EiJ m 4.01 0.115   14 0.0308 0.0288 3.84, 4.21 0.13
DBA/2J m 4.13 0.116   39 0.0186 0.0281 3.95, 4.38 1.13
FVB/NJ m 3.79 0.163   36 0.0272 0.0431 3.48, 4.08 -1.71
NOD/ShiLtJ m 4.05 0.122   37 0.02 0.03 3.78, 4.3 0.46
PWK/PhJ m 4.05 0.21   15 0.0542 0.0518 3.71, 4.39 0.46
WSB/EiJ m 4.0 0.226   14 0.0604 0.0564 3.65, 4.38 0.05


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 3.7799 0.0174 3.814 3.7457
A/J m 4.0558 0.0204 4.0958 4.0158
BALB/cByJ m 4.0289 0.0201 4.0684 3.9893
C3H/HeJ m 4.1278 0.0248 4.1765 4.0791
C57BL/6J m 3.9116 0.0129 3.937 3.8862
CAST/EiJ m 4.0097 0.0357 4.0798 3.9396
DBA/2J m 4.1348 0.0214 4.1768 4.0928
FVB/NJ m 3.7919 0.0222 3.8356 3.7482
NOD/ShiLtJ m 4.0491 0.0219 4.0922 4.0059
PWK/PhJ m 4.0483 0.0345 4.1161 3.9806
WSB/EiJ m 4.0047 0.0357 4.0748 3.9346




  GWAS USING LINEAR MIXED MODELS