Project measure / variable:   Loos2   spout_dur_LT

ID, description, units MPD:54013   spout_dur_LT   cumulative duration in spout zone, over 3 days of testing, log10 transformed   [log(s)]  during light phase  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
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  STRAIN COMPARISON PLOT
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Loos2 - cumulative duration in spout zone, over 3 days of testing, log10 transformed during light phase



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means2.20   log(s)
Median of the strain means2.32   log(s)
SD of the strain means± 0.450
Coefficient of variation (CV)0.204
Min–max range of strain means1.38   –   2.82   log(s)
Mean sample size per strain35.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 69.3015 6.9301 34.8079 < 0.0001
Residuals 426 84.8154 0.1991


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 2.0 0.414   59 0.054 0.207 0.292, 2.96 -0.45
A/J m 1.38 0.786   43 0.12 0.57 -1.83
BALB/cByJ m 2.11 0.309   44 0.0466 0.147 1.38, 2.64 -0.21
C3H/HeJ m 2.28 0.282   29 0.0523 0.123 1.58, 3.03 0.17
C57BL/6J m 2.35 0.308   107 0.0298 0.131 1.09, 3.03 0.32
CAST/EiJ m 2.82 0.132   14 0.0354 0.0471 2.61, 3.09 1.37
DBA/2J m 1.46 0.78   39 0.125 0.535 -1.65
FVB/NJ m 2.65 0.153   36 0.0255 0.0576 2.36, 2.98 0.99
NOD/ShiLtJ m 2.32 0.372   37 0.0612 0.161 1.21, 3.4 0.26
PWK/PhJ m 2.52 0.301   15 0.0778 0.12 2.1, 3.29 0.7
WSB/EiJ m 2.36 0.402   14 0.107 0.17 1.59, 3.12 0.35


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 2.0029 0.0581 2.1171 1.8887
A/J m 1.379 0.068 1.5127 1.2452
BALB/cByJ m 2.107 0.0673 2.2392 1.9748
C3H/HeJ m 2.2827 0.0829 2.4456 2.1199
C57BL/6J m 2.3476 0.0431 2.4324 2.2628
CAST/EiJ m 2.8156 0.1193 3.05 2.5812
DBA/2J m 1.4565 0.0714 1.5969 1.3161
FVB/NJ m 2.6535 0.0744 2.7997 2.5074
NOD/ShiLtJ m 2.3163 0.0734 2.4605 2.1721
PWK/PhJ m 2.5151 0.1152 2.7415 2.2886
WSB/EiJ m 2.3596 0.1193 2.594 2.1252




  GWAS USING LINEAR MIXED MODELS