Project measure / variable:   Odet2   sperm_STR_60

ID, description, units MPD:53890   sperm_STR_60   sperm mean straightness   [ratio]  at 60 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - sperm mean straightness at 60 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means60.0   ratio
Median of the strain means61.0   ratio
SD of the strain means± 5.98
Coefficient of variation (CV)0.0996
Min–max range of strain means48.2   –   67.1   ratio
Mean sample size per strain12.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 2754.8729 393.5533 7.1755 < 0.0001
Residuals 92 5045.8771 54.8465


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 56.6 5.85   17 1.42 0.103 44.0, 64.0 -0.57
A/J m 65.7 5.88   13 1.63 0.0895 55.0, 74.0 0.95
C57BL/6J m 57.7 6.0   11 1.81 0.104 47.0, 65.0 -0.39
CAST/EiJ m 60.1 4.62   12 1.33 0.0769 55.0, 72.0 0.01
NOD/ShiLtJ m 48.2 7.82   9 2.61 0.162 35.0, 64.0 -1.98
NZO/HlLtJ m 62.0 6.04   10 1.91 0.0974 55.0, 72.0 0.33
PWK/PhJ m 62.7 13.0   14 3.47 0.207 44.0, 79.0 0.45
WSB/EiJ m 67.1 6.06   14 1.62 0.0903 57.0, 79.0 1.19


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 56.6471 1.7962 60.2144 53.0797
A/J m 65.6923 2.054 69.7718 61.6129
C57BL/6J m 57.7273 2.2329 62.1621 53.2925
CAST/EiJ m 60.0833 2.1379 64.3294 55.8373
NOD/ShiLtJ m 48.2222 2.4686 53.1251 43.3193
NZO/HlLtJ m 62.0 2.3419 66.6513 57.3487
PWK/PhJ m 62.7143 1.9793 66.6453 58.7832
WSB/EiJ m 67.1429 1.9793 71.0739 63.2118




  GWAS USING LINEAR MIXED MODELS