Project measure / variable:   Odet2   sperm_STR_30

ID, description, units MPD:53889   sperm_STR_30   sperm mean straightness   [ratio]  at 30 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - sperm mean straightness at 30 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means68.1   ratio
Median of the strain means66.6   ratio
SD of the strain means± 5.53
Coefficient of variation (CV)0.0812
Min–max range of strain means60.0   –   77.2   ratio
Mean sample size per strain13.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 2992.4048 427.4864 11.8984 < 0.0001
Residuals 97 3485.0238 35.9281


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 60.0 7.85   15 2.03 0.131 42.0, 71.0 -1.47
A/J m 67.2 8.58   16 2.15 0.128 47.0, 78.0 -0.17
C57BL/6J m 66.0 5.29   11 1.6 0.0802 57.0, 72.0 -0.39
CAST/EiJ m 65.1 2.71   12 0.783 0.0417 61.0, 70.0 -0.55
NOD/ShiLtJ m 64.7 6.6   10 2.09 0.102 53.0, 73.0 -0.62
NZO/HlLtJ m 71.4 3.6   12 1.04 0.0505 68.0, 79.0 0.59
PWK/PhJ m 73.5 5.83   15 1.51 0.0793 66.0, 83.0 0.97
WSB/EiJ m 77.2 3.36   14 0.897 0.0435 73.0, 85.0 1.64


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 60.0 1.5476 63.0716 56.9284
A/J m 67.25 1.4985 70.2241 64.2759
C57BL/6J m 66.0 1.8073 69.5869 62.4131
CAST/EiJ m 65.0833 1.7303 68.5175 61.6491
NOD/ShiLtJ m 64.7 1.8955 68.462 60.938
NZO/HlLtJ m 71.4167 1.7303 74.8509 67.9825
PWK/PhJ m 73.4667 1.5476 76.5383 70.395
WSB/EiJ m 77.2143 1.602 80.3937 74.0348




  GWAS USING LINEAR MIXED MODELS