Project measure / variable:   Odet2   sperm_VAP_120

ID, description, units MPD:53859   sperm_VAP_120   sperm mean path velocity   [µm/s]  at 120 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - sperm mean path velocity at 120 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means98.1   µm/s
Median of the strain means98.9   µm/s
SD of the strain means± 16.6
Coefficient of variation (CV)0.169
Min–max range of strain means73.7   –   124   µm/s
Mean sample size per strain12.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 25235.2121 3605.0303 26.2998 < 0.0001
Residuals 95 13022.0631 137.0743


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 89.8 10.0   17 2.43 0.112 70.4, 108.0 -0.5
A/J m 92.8 8.17   14 2.18 0.0881 72.5, 106.0 -0.32
C57BL/6J m 81.8 18.7   11 5.63 0.229 44.3, 96.0 -0.98
CAST/EiJ m 73.7 7.96   12 2.3 0.108 64.4, 95.3 -1.47
NOD/ShiLtJ m 106.0 12.6   10 3.98 0.119 78.6, 123.0 0.47
NZO/HlLtJ m 105.0 8.95   10 2.83 0.0853 86.6, 116.0 0.41
PWK/PhJ m 112.0 14.1   15 3.63 0.126 82.0, 130.0 0.83
WSB/EiJ m 124.0 10.5   14 2.81 0.0846 110.0, 143.0 1.56


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 89.7647 2.8396 95.402 84.1274
A/J m 92.7786 3.1291 98.9905 86.5666
C57BL/6J m 81.7545 3.5301 88.7626 74.7465
CAST/EiJ m 73.675 3.3798 80.3847 66.9653
NOD/ShiLtJ m 105.77 3.7024 113.1201 98.4199
NZO/HlLtJ m 104.84 3.7024 112.1901 97.4899
PWK/PhJ m 111.8133 3.023 117.8147 105.812
WSB/EiJ m 124.4286 3.1291 130.6405 118.2166




  GWAS USING LINEAR MIXED MODELS