Project measure / variable:   Odet2   sperm_vigor_60

ID, description, units MPD:53837   sperm_vigor_60   percentage of motile sperm that are 'vigorous'   [%]  at 60 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - percentage of motile sperm that are 'vigorous' at 60 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means37.3   %
Median of the strain means35.5   %
SD of the strain means± 17.3
Coefficient of variation (CV)0.464
Min–max range of strain means14.0   –   67.3   %
Mean sample size per strain12.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 27287.1197 3898.16 24.4351 < 0.0001
Residuals 92 14676.8878 159.5314


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 26.0 10.0   17 2.43 0.385 12.2, 48.9 -0.65
A/J m 35.9 11.5   13 3.19 0.32 16.6, 50.2 -0.08
C57BL/6J m 21.9 14.5   11 4.37 0.663 -0.89
CAST/EiJ m 14.0 8.28   12 2.39 0.592 6.3, 35.6 -1.35
NOD/ShiLtJ m 35.0 16.0   9 5.32 0.457 14.8, 58.5 -0.13
NZO/HlLtJ m 49.1 8.46   10 2.68 0.172 39.2, 67.9 0.69
PWK/PhJ m 48.9 17.9   14 4.79 0.367 24.0, 84.4 0.67
WSB/EiJ m 67.3 11.6   14 3.11 0.173 43.2, 82.4 1.74


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 25.9824 3.0634 32.0665 19.8982
A/J m 35.9385 3.5031 42.8959 28.981
C57BL/6J m 21.8636 3.8083 29.4272 14.3001
CAST/EiJ m 14.0 3.6461 21.2415 6.7585
NOD/ShiLtJ m 34.9667 4.2102 43.3285 26.6049
NZO/HlLtJ m 49.11 3.9941 57.0427 41.1773
PWK/PhJ m 48.9071 3.3757 55.6115 42.2028
WSB/EiJ m 67.3286 3.3757 74.0329 60.6242




  GWAS USING LINEAR MIXED MODELS