Project measure / variable:   Odet2   sperm_hyper_60

ID, description, units MPD:53830   sperm_hyper_60   percentage of motile sperm that are 'hyperactivated'   [%]  at 60 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
Procedure microscopy
Ontology mappings

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  STRAIN COMPARISON PLOT


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means9.52   %
Median of the strain means8.61   %
SD of the strain means± 5.76
Coefficient of variation (CV)0.605
Min–max range of strain means2.73   –   18.7   %
Mean sample size per strain12.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 2663.442 380.4917 8.4971 < 0.0001
Residuals 92 4119.6596 44.7789


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ m 7.01 6.51   17 1.58 0.929 -0.44
A/J m 2.73 2.06   13 0.572 0.755 -1.18
C57BL/6J m 4.73 3.35   11 1.01 0.708 -0.83
CAST/EiJ m 4.31 3.65   12 1.05 0.847 0.5, 11.4 -0.91
NOD/ShiLtJ m 18.7 9.58   9 3.19 0.512 1.1, 31.5 1.59
NZO/HlLtJ m 10.2 3.69   10 1.17 0.362 6.0, 16.2 0.12
PWK/PhJ m 14.1 11.1   14 2.96 0.788 0.8
WSB/EiJ m 14.4 7.24   14 1.93 0.503 3.9, 25.8 0.85


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 7.0118 1.623 10.2351 3.7884
A/J m 2.7308 1.8559 6.4168 0.0
C57BL/6J m 4.7273 2.0176 8.7344 0.7201
CAST/EiJ m 4.3083 1.9317 8.1449 0.4718
NOD/ShiLtJ m 18.7 2.2306 23.1301 14.2699
NZO/HlLtJ m 10.21 2.1161 14.4128 6.0072
PWK/PhJ m 14.0571 1.7884 17.6091 10.5052
WSB/EiJ m 14.4 1.7884 17.952 10.848




  GWAS USING LINEAR MIXED MODELS

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