Project measure / variable:   Odet2   sperm_int_90

ID, description, units MPD:53824   sperm_int_90   percentage of motile sperm that are 'intermediate'   [%]  at 90 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - percentage of motile sperm that are 'intermediate' at 90 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means3.55   %
Median of the strain means2.69   %
SD of the strain means± 3.54
Coefficient of variation (CV)0.998
Min–max range of strain means0.791   –   11.6   %
Mean sample size per strain13.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 1161.3012 165.9002 15.7198 < 0.0001
Residuals 97 1023.6954 10.5536


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 2.22 1.58   16 0.395 0.712 -0.37
A/J m 3.16 2.86   14 0.765 0.907 -0.11
C57BL/6J m 0.791 0.951   11 0.287 1.2 -0.78
CAST/EiJ m 0.875 0.692   12 0.2 0.79 -0.75
NOD/ShiLtJ m 1.28 1.05   10 0.331 0.817 -0.64
NZO/HlLtJ m 4.41 1.82   15 0.469 0.412 1.4, 7.0 0.24
PWK/PhJ m 4.03 2.42   13 0.67 0.599 0.4, 8.0 0.14
WSB/EiJ m 11.6 7.54   14 2.02 0.652 3.9, 26.6 2.28


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 2.2187 0.8122 3.8307 0.6068
A/J m 3.1571 0.8682 4.8803 1.4339
C57BL/6J m 0.7909 0.9795 2.7349 0.0
CAST/EiJ m 0.875 0.9378 2.7363 0.0
NOD/ShiLtJ m 1.28 1.0273 3.3189 0.0
NZO/HlLtJ m 4.4067 0.8388 6.0714 2.7419
PWK/PhJ m 4.0308 0.901 5.819 2.2425
WSB/EiJ m 11.5643 0.8682 13.2875 9.8411




  GWAS USING LINEAR MIXED MODELS