Project measure / variable:   Odet2   sperm_int_60

ID, description, units MPD:53823   sperm_int_60   percentage of motile sperm that are 'intermediate'   [%]  at 60 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - percentage of motile sperm that are 'intermediate' at 60 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means3.91   %
Median of the strain means2.71   %
SD of the strain means± 2.83
Coefficient of variation (CV)0.723
Min–max range of strain means1.42   –   9.33   %
Mean sample size per strain12.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 745.0489 106.4356 7.4519 < 0.0001
Residuals 92 1314.0411 14.2831


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 2.6 2.06   17 0.499 0.792 -0.46
A/J m 2.82 3.55   13 0.985 1.26 -0.39
C57BL/6J m 1.46 1.2   11 0.362 0.821 -0.87
CAST/EiJ m 1.42 1.25   12 0.362 0.88 -0.88
NOD/ShiLtJ m 2.59 3.08   9 1.03 1.19 -0.47
NZO/HlLtJ m 4.06 2.32   10 0.732 0.57 0.3, 7.5 0.05
PWK/PhJ m 7.03 5.56   14 1.49 0.791 1.6, 16.1 1.1
WSB/EiJ m 9.33 6.43   14 1.72 0.689 2.2, 22.6 1.92


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 2.6 0.9166 4.4205 0.7795
A/J m 2.8231 1.0482 4.9049 0.7413
C57BL/6J m 1.4636 1.1395 3.7268 0.0
CAST/EiJ m 1.425 1.091 3.5918 0.0
NOD/ShiLtJ m 2.5889 1.2598 5.0909 0.0869
NZO/HlLtJ m 4.06 1.1951 6.4336 1.6864
PWK/PhJ m 7.0286 1.0101 9.0346 5.0225
WSB/EiJ m 9.3286 1.0101 11.3346 7.3225




  GWAS USING LINEAR MIXED MODELS