Project measure / variable:   Odet2   sperm_int_30

ID, description, units MPD:53822   sperm_int_30   percentage of motile sperm that are 'intermediate'   [%]  at 30 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - percentage of motile sperm that are 'intermediate' at 30 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means5.98   %
Median of the strain means4.02   %
SD of the strain means± 4.60
Coefficient of variation (CV)0.770
Min–max range of strain means3.23   –   16.9   %
Mean sample size per strain13.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 2169.6372 309.9482 13.6275 < 0.0001
Residuals 97 2206.2051 22.7444


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 3.63 2.49   15 0.644 0.686 0.7, 8.3 -0.51
A/J m 3.45 2.59   16 0.647 0.75 -0.55
C57BL/6J m 4.24 4.5   11 1.36 1.06 -0.38
CAST/EiJ m 3.79 2.1   12 0.607 0.555 -0.48
NOD/ShiLtJ m 7.16 5.69   10 1.8 0.795 0.8, 18.0 0.26
NZO/HlLtJ m 3.23 3.18   12 0.918 0.984 -0.6
PWK/PhJ m 16.9 8.4   15 2.17 0.497 4.8, 36.5 2.37
WSB/EiJ m 5.41 5.39   14 1.44 0.996 0.6, 17.3 -0.12


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 3.6333 1.2314 6.0773 1.1894
A/J m 3.45 1.1923 5.8163 1.0837
C57BL/6J m 4.2364 1.4379 7.0903 1.3825
CAST/EiJ m 3.7917 1.3767 6.5241 1.0593
NOD/ShiLtJ m 7.16 1.5081 10.1532 4.1668
NZO/HlLtJ m 3.2333 1.3767 5.9657 0.5009
PWK/PhJ m 16.8933 1.2314 19.3373 14.4494
WSB/EiJ m 5.4143 1.2746 7.944 2.8846




  GWAS USING LINEAR MIXED MODELS