Project measure / variable:   Odet2   sperm_prog_90

ID, description, units MPD:53818   sperm_prog_90   percentage of motile sperm that are 'progressive'   [%]  at 90 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - percentage of motile sperm that are 'progressive' at 90 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means17.9   %
Median of the strain means16.6   %
SD of the strain means± 9.66
Coefficient of variation (CV)0.540
Min–max range of strain means5.14   –   31.3   %
Mean sample size per strain13.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 8433.2912 1204.7559 10.8697 < 0.0001
Residuals 97 10751.138 110.8365


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 12.8 5.94   16 1.49 0.463 4.3, 25.0 -0.53
A/J m 27.0 9.46   14 2.53 0.35 7.8, 39.3 0.94
C57BL/6J m 9.9 9.29   11 2.8 0.939 -0.83
CAST/EiJ m 5.14 2.52   12 0.727 0.49 -1.32
NOD/ShiLtJ m 10.2 7.49   10 2.37 0.737 3.7, 29.5 -0.8
NZO/HlLtJ m 26.4 8.23   15 2.12 0.312 12.5, 46.7 0.88
PWK/PhJ m 20.4 19.1   13 5.3 0.938 2.3, 57.5 0.26
WSB/EiJ m 31.3 13.2   14 3.54 0.424 7.4, 50.8 1.39


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 12.85 2.632 18.0737 7.6263
A/J m 27.0214 2.8137 32.6058 21.437
C57BL/6J m 9.9 3.1743 16.2001 3.5999
CAST/EiJ m 5.1417 3.0391 11.1735 0.0
NOD/ShiLtJ m 10.17 3.3292 16.7776 3.5624
NZO/HlLtJ m 26.4 2.7183 31.7951 21.0049
PWK/PhJ m 20.3923 2.9199 26.1875 14.5971
WSB/EiJ m 31.25 2.8137 36.8344 25.6656




  GWAS USING LINEAR MIXED MODELS