Project measure / variable:   Odet2   sperm_motile_90

ID, description, units MPD:53811   sperm_motile_90   percentage of sperm that are motile   [%]  at 90 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - percentage of sperm that are motile at 90 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means53.7   %
Median of the strain means60.0   %
SD of the strain means± 12.3
Coefficient of variation (CV)0.229
Min–max range of strain means25.2   –   61.8   %
Mean sample size per strain13.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 13038.5371 1862.6482 17.6869 < 0.0001
Residuals 97 10215.3105 105.3125


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 59.6 6.62   16 1.66 0.111 47.0, 70.0 0.48
A/J m 50.2 9.12   14 2.44 0.182 26.0, 63.0 -0.28
C57BL/6J m 60.3 9.46   11 2.85 0.157 36.0, 71.0 0.54
CAST/EiJ m 25.2 5.78   12 1.67 0.23 17.0, 35.0 -2.31
NOD/ShiLtJ m 60.4 17.7   10 5.58 0.292 23.0, 83.0 0.55
NZO/HlLtJ m 60.3 7.18   15 1.85 0.119 42.0, 69.0 0.54
PWK/PhJ m 51.6 14.5   13 4.01 0.28 21.0, 67.0 -0.17
WSB/EiJ m 61.8 9.53   14 2.55 0.154 46.0, 78.0 0.66


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 59.5625 2.5655 64.6544 54.4706
A/J m 50.2143 2.7427 55.6578 44.7708
C57BL/6J m 60.2727 3.0942 66.4138 54.1317
CAST/EiJ m 25.1667 2.9624 31.0463 19.287
NOD/ShiLtJ m 60.4 3.2452 66.8408 53.9592
NZO/HlLtJ m 60.3333 2.6497 65.5922 55.0744
PWK/PhJ m 51.6154 2.8462 57.2643 45.9664
WSB/EiJ m 61.7857 2.7427 67.2292 56.3422




  GWAS USING LINEAR MIXED MODELS