Phenotype measure:   Reed2   kidney_wt

ID, description, units MPD:53146   kidney_wt   kidney weight (both)   [g]
Data set, strains Reed2   B6.129 and 129.B6 consomic w/par   9 strains     sex: both     age: 26wks
Procedure organ weights
Ontology mappings

  STRAIN COMPARISON PLOT
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Reed2 - kidney weight (both)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means0.366   g 0.480   g
Median of the strain means0.370   g 0.484   g
SD of the strain means± 0.0588 ± 0.0610
Coefficient of variation (CV)0.161 0.127
Min–max range of strain means0.279   –   0.448   g 0.401   –   0.570   g
Mean sample size per strain18.0   mice 16.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.907 0.907 287.0104 < 0.0001
strain 8 0.751 0.0939 29.7053 < 0.0001
sex:strain 8 0.0388 0.0048 1.5339 0.1452
Residuals 277 0.8754 0.0032


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3.B6By-Chr1 f 0.403 0.0555   19 0.0127 0.138 0.3, 0.5 0.63
129P3.B6By-Chr1 m 0.477 0.0646   19 0.0148 0.136 0.36, 0.64 -0.05
129P3.B6By-Chr2 f 0.42 0.0476   4 0.0238 0.113 0.39, 0.49 0.92
129P3.B6By-Chr2 m 0.55 0.0943   5 0.0422 0.172 0.46, 0.66 1.14
129P3.B6By-Chr7 f 0.279 0.0624   20 0.0139 0.223 0.08, 0.36 -1.48
129P3.B6By-Chr7 m 0.406 0.0636   20 0.0142 0.157 0.28, 0.55 -1.21
129P3.B6By-Chr9 f 0.448 0.0505   10 0.016 0.113 0.35, 0.53 1.39
129P3.B6By-Chr9 m 0.57 0.0803   10 0.0254 0.141 0.42, 0.67 1.47
129P3/J f 0.402 0.0458   24 0.00934 0.114 0.31, 0.48 0.61
129P3/J m 0.501 0.066   14 0.0176 0.132 0.38, 0.61 0.34
B6By.129P3-Chr2 f 0.284 0.0316   16 0.0079 0.111 0.23, 0.35 -1.4
B6By.129P3-Chr2 m 0.401 0.0328   15 0.00848 0.0819 0.35, 0.46 -1.3
B6By.129P3-Chr7 f 0.37 0.0669   20 0.015 0.181 0.28, 0.58 0.07
B6By.129P3-Chr7 m 0.512 0.0679   20 0.0152 0.133 0.43, 0.69 0.52
B6By.129P3-Chr9 f 0.337 0.0546   20 0.0122 0.162 0.25, 0.48 -0.5
B6By.129P3-Chr9 m 0.42 0.0577   18 0.0136 0.137 0.31, 0.53 -0.98
C57BL/6ByJ f 0.352 0.0348   21 0.00759 0.0987 0.29, 0.43 -0.24
C57BL/6ByJ m 0.484 0.0367   20 0.00822 0.076 0.41, 0.55 0.06


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3.B6By-Chr1 f 0.4026 0.0129 0.428 0.3772
129P3.B6By-Chr1 m 0.4768 0.0129 0.5022 0.4515
129P3.B6By-Chr2 f 0.42 0.0281 0.4753 0.3647
129P3.B6By-Chr2 m 0.55 0.0251 0.5995 0.5005
129P3.B6By-Chr7 f 0.2795 0.0126 0.3042 0.2548
129P3.B6By-Chr7 m 0.4055 0.0126 0.4302 0.3808
129P3.B6By-Chr9 f 0.448 0.0178 0.483 0.413
129P3.B6By-Chr9 m 0.57 0.0178 0.605 0.535
129P3/J f 0.4021 0.0115 0.4247 0.3795
129P3/J m 0.5014 0.015 0.531 0.4719
B6By.129P3-Chr2 f 0.2838 0.0141 0.3114 0.2561
B6By.129P3-Chr2 m 0.4007 0.0145 0.4292 0.3721
B6By.129P3-Chr7 f 0.3695 0.0126 0.3942 0.3448
B6By.129P3-Chr7 m 0.5115 0.0126 0.5362 0.4868
B6By.129P3-Chr9 f 0.3365 0.0126 0.3612 0.3118
B6By.129P3-Chr9 m 0.42 0.0133 0.4461 0.3939
C57BL/6ByJ f 0.3524 0.0123 0.3765 0.3282
C57BL/6ByJ m 0.4835 0.0126 0.5082 0.4588


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129P3.B6By-Chr1 both 0.4397 0.0091 0.4577 0.4218
129P3.B6By-Chr2 both 0.485 0.0189 0.5221 0.4479
129P3.B6By-Chr7 both 0.3425 0.0089 0.36 0.325
129P3.B6By-Chr9 both 0.509 0.0126 0.5337 0.4843
129P3/J both 0.4518 0.0095 0.4704 0.4331
B6By.129P3-Chr2 both 0.3422 0.0101 0.3621 0.3223
B6By.129P3-Chr7 both 0.4405 0.0089 0.458 0.423
B6By.129P3-Chr9 both 0.3783 0.0091 0.3962 0.3603
C57BL/6ByJ both 0.4179 0.0088 0.4352 0.4007




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA