Phenotype measure:   Reed2   body_length

ID, description, units MPD:53102   body_length   body length (bottom of incisors to anus)   [cm]
Data set, strains Reed2   B6.129 and 129.B6 consomic w/par   9 strains     sex: both     age: 26wks
Procedure body size and weight
Ontology mappings

  STRAIN COMPARISON PLOT
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Reed2 - body length (bottom of incisors to anus)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means9.01   cm 9.06   cm
Median of the strain means9.02   cm 8.88   cm
SD of the strain means± 0.366 ± 0.350
Coefficient of variation (CV)0.0406 0.0386
Min–max range of strain means8.27   –   9.45   cm 8.68   –   9.60   cm
Mean sample size per strain18.0   mice 16.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.3363 0.3363 1.6663 0.1978
strain 8 27.4545 3.4318 17.0052 < 0.0001
sex:strain 8 3.261 0.4076 2.0199 0.0442
Residuals 276 55.6995 0.2018


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3.B6By-Chr1 f 8.93 0.413   19 0.0949 0.0463 7.9, 9.5 -0.23
129P3.B6By-Chr1 m 8.87 0.318   19 0.0729 0.0358 8.4, 9.4 -0.54
129P3.B6By-Chr2 f 9.45 0.289   4 0.144 0.0305 9.1, 9.8 1.19
129P3.B6By-Chr2 m 9.6 0.187   5 0.0837 0.0195 9.4, 9.8 1.55
129P3.B6By-Chr7 f 8.27 0.707   20 0.158 0.0855 6.6, 9.2 -2.03
129P3.B6By-Chr7 m 8.75 0.505   19 0.116 0.0577 7.4, 9.5 -0.88
129P3.B6By-Chr9 f 9.22 0.498   10 0.158 0.0541 7.9, 9.6 0.57
129P3.B6By-Chr9 m 9.12 0.445   11 0.134 0.0488 8.1, 9.5 0.17
129P3/J f 9.02 0.343   23 0.0716 0.0381 8.3, 9.7 0.02
129P3/J m 8.8 0.495   14 0.132 0.0562 8.0, 10.0 -0.74
B6By.129P3-Chr2 f 8.71 0.312   16 0.0779 0.0358 8.1, 9.1 -0.83
B6By.129P3-Chr2 m 8.68 0.36   14 0.0962 0.0415 8.1, 9.4 -1.08
B6By.129P3-Chr7 f 9.44 0.499   20 0.112 0.0528 8.4, 10.4 1.17
B6By.129P3-Chr7 m 9.58 0.356   20 0.0797 0.0372 8.8, 10.3 1.49
B6By.129P3-Chr9 f 9.01 0.519   20 0.116 0.0576 7.8, 9.7 -0.01
B6By.129P3-Chr9 m 8.88 0.505   19 0.116 0.0568 8.0, 10.0 -0.51
C57BL/6ByJ f 9.07 0.466   21 0.102 0.0514 8.2, 9.9 0.15
C57BL/6ByJ m 9.25 0.325   20 0.0727 0.0352 8.6, 9.7 0.55


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3.B6By-Chr1 f 8.9263 0.1031 9.1292 8.7234
129P3.B6By-Chr1 m 8.8737 0.1031 9.0766 8.6708
129P3.B6By-Chr2 f 9.45 0.2246 9.8922 9.0078
129P3.B6By-Chr2 m 9.6 0.2009 9.9955 9.2045
129P3.B6By-Chr7 f 8.27 0.1005 8.4677 8.0723
129P3.B6By-Chr7 m 8.7474 0.1031 8.9503 8.5445
129P3.B6By-Chr9 f 9.22 0.1421 9.4997 8.9403
129P3.B6By-Chr9 m 9.1182 0.1354 9.3848 8.8515
129P3/J f 9.0174 0.0937 9.2018 8.833
129P3/J m 8.8 0.1201 9.0364 8.5636
B6By.129P3-Chr2 f 8.7125 0.1123 8.9336 8.4914
B6By.129P3-Chr2 m 8.6786 0.1201 8.9149 8.4422
B6By.129P3-Chr7 f 9.44 0.1005 9.6377 9.2423
B6By.129P3-Chr7 m 9.58 0.1005 9.7777 9.3823
B6By.129P3-Chr9 f 9.01 0.1005 9.2077 8.8123
B6By.129P3-Chr9 m 8.8842 0.1031 9.0871 8.6813
C57BL/6ByJ f 9.0667 0.098 9.2596 8.8737
C57BL/6ByJ m 9.25 0.1005 9.4477 9.0523


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129P3.B6By-Chr1 both 8.9 0.0729 9.0435 8.7565
129P3.B6By-Chr2 both 9.525 0.1507 9.8216 9.2284
129P3.B6By-Chr7 both 8.5087 0.072 8.6503 8.367
129P3.B6By-Chr9 both 9.1691 0.0981 9.3623 8.9759
129P3/J both 8.9087 0.0761 9.0586 8.7588
B6By.129P3-Chr2 both 8.6955 0.0822 8.8574 8.5337
B6By.129P3-Chr7 both 9.51 0.071 9.6498 9.3702
B6By.129P3-Chr9 both 8.9471 0.072 9.0888 8.8054
C57BL/6ByJ both 9.1583 0.0702 9.2965 9.0202




GWAS analysis not available: At least 12 strains are required