Phenotype measure:   Nadeau2   liver_TG_tot

ID, description, units MPD:53053   liver_TG_tot   total liver triglycerides   [g]
high-fat high-sucrose diet study
Data set, strains Nadeau2   B6.A consomic w/par   24 strains     sex: m     age: 21wks
Procedure lipid profile
Ontology mappings

  STRAIN COMPARISON PLOT
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Nadeau2 - total liver triglycerides



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested24 strains
Mean of the strain means216   g
Median of the strain means163   g
SD of the strain means± 118
Coefficient of variation (CV)0.546
Min–max range of strain means59.0   –   481   g
Mean sample size per strain39.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 23 15219902.2591 661734.8808 27.7982 < 0.0001
Residuals 954 22709956.6719 23804.986


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J m 59.0 20.1   95 2.06 0.34 24.4, 118.0 -1.33
B6.A-Chr1 m 310.0 139.0   27 26.7 0.447 94.8, 582.0 0.8
B6.A-Chr10 m 140.0 40.6   76 4.66 0.289 56.1, 259.0 -0.65
B6.A-Chr11 m 193.0 117.0   36 19.5 0.607 39.2, 458.0 -0.2
B6.A-Chr12 m 207.0 93.0   35 15.7 0.448 105.0, 491.0 -0.08
B6.A-Chr13 m 157.0 86.6   27 16.7 0.55 41.6, 447.0 -0.5
B6.A-Chr14 m 140.0 50.1   34 8.6 0.357 80.9, 307.0 -0.65
B6.A-Chr15 m 118.0 31.9   27 6.14 0.27 59.5, 174.0 -0.83
B6.A-Chr16 m 148.0 52.9   37 8.7 0.357 81.8, 296.0 -0.58
B6.A-Chr17 m 138.0 23.0   36 3.83 0.167 84.2, 191.0 -0.66
B6.A-Chr18 m 464.0 311.0   38 50.5 0.671 116.0, 1236.0 2.1
B6.A-Chr19 m 242.0 145.0   34 24.8 0.598 113.0, 622.0 0.22
B6.A-Chr2 m 321.0 245.0   34 42.1 0.764 115.0, 894.0 0.89
B6.A-Chr3 m 153.0 92.0   40 14.5 0.601 28.0, 392.0 -0.54
B6.A-Chr4 m 212.0 69.8   38 11.3 0.329 74.2, 378.0 -0.03
B6.A-Chr5 m 169.0 82.0   38 13.3 0.486 57.0, 384.0 -0.4
B6.A-Chr6 m 154.0 63.5   38 10.3 0.411 68.4, 355.0 -0.53
B6.A-Chr7 m 130.0 57.7   34 9.9 0.443 30.4, 240.0 -0.73
B6.A-Chr8 m 123.0 24.9   34 4.27 0.203 62.4, 194.0 -0.79
B6.A-Chr9 m 481.0 366.0   33 63.7 0.76 116.0, 1505.0 2.25
B6.A-ChrX m 396.0 224.0   36 37.3 0.565 119.0, 873.0 1.53
B6.A-ChrY m 170.0 87.4   31 15.7 0.515 38.6, 419.0 -0.39
B6.A-mt m 143.0 32.3   24 6.6 0.227 77.7, 257.0 -0.62
C57BL/6J m 418.0 277.0   96 28.2 0.662 54.7, 1255.0 1.71


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 58.9962 15.8297 90.0612 27.9312
B6.A-Chr1 m 309.8315 29.6929 368.1024 251.5606
B6.A-Chr10 m 140.4662 17.6981 175.1979 105.7344
B6.A-Chr11 m 192.6275 25.7148 243.0916 142.1634
B6.A-Chr12 m 207.2623 26.0795 258.4422 156.0824
B6.A-Chr13 m 157.397 29.6929 215.6679 99.1262
B6.A-Chr14 m 140.2497 26.4603 192.1768 88.3226
B6.A-Chr15 m 118.3793 29.6929 176.6501 60.1084
B6.A-Chr16 m 148.4443 25.3649 198.2218 98.6669
B6.A-Chr17 m 137.7731 25.7148 188.2371 87.309
B6.A-Chr18 m 463.6571 25.0289 512.7752 414.539
B6.A-Chr19 m 241.7271 26.4603 293.6541 189.8
B6.A-Chr2 m 321.0044 26.4603 372.9315 269.0773
B6.A-Chr3 m 153.1077 24.3952 200.9822 105.2333
B6.A-Chr4 m 211.9889 25.0289 261.1071 162.8708
B6.A-Chr5 m 168.7639 25.0289 217.8821 119.6458
B6.A-Chr6 m 154.3666 25.0289 203.4847 105.2485
B6.A-Chr7 m 130.1532 26.4603 182.0803 78.2262
B6.A-Chr8 m 122.5712 26.4603 174.4983 70.6441
B6.A-Chr9 m 481.3348 26.8582 534.0428 428.6269
B6.A-ChrX m 395.9681 25.7148 446.4321 345.504
B6.A-ChrY m 169.6513 27.7111 224.033 115.2696
B6.A-mt m 142.5037 31.494 204.3093 80.6982
C57BL/6J m 417.6142 15.747 448.517 386.7114




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA