Phenotype measure

ID, description, units MPD:53012   BMI   body mass index (BMI)   [g/cm2]
high-fat high-sucrose diet study
Data set, strains Nadeau2   B6.A consomic w/par   24 strains     sex: m     age: 21wks
Procedure body size and weight
Ontology mappings


  STRAIN COMPARISON PLOT
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Nadeau2 - body mass index (BMI)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested24 strains
Mean of the strain means0.357   g/cm2
Median of the strain means0.352   g/cm2
SD of the strain means± 0.0416
Coefficient of variation (CV)0.117
Min–max range of strain means0.263   –   0.432   g/cm2
Mean sample size per strain39.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 23 1.9837 0.0862 59.3996 < 0.0001
Residuals 954 1.3852 0.0015


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J m 0.263 0.0246   95 0.00252 0.0935 0.21, 0.33 -2.25
B6.A-Chr1 m 0.397 0.0308   27 0.00592 0.0775 0.34, 0.45 0.97
B6.A-Chr10 m 0.339 0.0443   76 0.00509 0.131 0.24, 0.43 -0.43
B6.A-Chr11 m 0.37 0.0572   36 0.00953 0.155 0.25, 0.48 0.32
B6.A-Chr12 m 0.363 0.0423   35 0.00715 0.116 0.3, 0.44 0.15
B6.A-Chr13 m 0.338 0.0334   27 0.00643 0.0988 0.28, 0.39 -0.45
B6.A-Chr14 m 0.356 0.0356   34 0.00611 0.1 0.29, 0.43 -0.02
B6.A-Chr15 m 0.337 0.0409   27 0.00788 0.121 0.28, 0.43 -0.47
B6.A-Chr16 m 0.364 0.0414   37 0.00681 0.114 0.27, 0.46 0.18
B6.A-Chr17 m 0.313 0.033   36 0.00549 0.105 0.25, 0.36 -1.05
B6.A-Chr18 m 0.432 0.0436   38 0.00708 0.101 0.32, 0.52 1.81
B6.A-Chr19 m 0.406 0.0451   34 0.00774 0.111 0.32, 0.47 1.18
B6.A-Chr2 m 0.413 0.04   34 0.00685 0.0968 0.33, 0.49 1.35
B6.A-Chr3 m 0.325 0.0376   40 0.00594 0.116 0.26, 0.4 -0.76
B6.A-Chr4 m 0.325 0.0299   38 0.00486 0.0922 0.27, 0.39 -0.76
B6.A-Chr5 m 0.351 0.0265   38 0.00431 0.0757 0.3, 0.4 -0.14
B6.A-Chr6 m 0.324 0.0291   38 0.00472 0.0897 0.27, 0.38 -0.79
B6.A-Chr7 m 0.309 0.0319   34 0.00547 0.103 0.26, 0.37 -1.15
B6.A-Chr8 m 0.321 0.0314   34 0.00539 0.098 0.27, 0.41 -0.86
B6.A-Chr9 m 0.415 0.0296   33 0.00515 0.0712 0.33, 0.47 1.4
B6.A-ChrX m 0.415 0.0371   36 0.00619 0.0896 0.32, 0.46 1.4
B6.A-ChrY m 0.354 0.0349   31 0.00627 0.0986 0.3, 0.41 -0.07
B6.A-mt m 0.34 0.0318   24 0.0065 0.0935 0.29, 0.39 -0.4
C57BL/6J m 0.391 0.0491   96 0.00501 0.126 0.25, 0.48 0.82


  LEAST SQUARES MEANS (ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 0.2628 0.0039 0.2705 0.2552
B6.A-Chr1 m 0.3967 0.0073 0.4111 0.3823
B6.A-Chr10 m 0.3393 0.0044 0.3479 0.3308
B6.A-Chr11 m 0.37 0.0064 0.3825 0.3575
B6.A-Chr12 m 0.3634 0.0064 0.3761 0.3508
B6.A-Chr13 m 0.3381 0.0073 0.3525 0.3238
B6.A-Chr14 m 0.3556 0.0065 0.3684 0.3428
B6.A-Chr15 m 0.337 0.0073 0.3514 0.3226
B6.A-Chr16 m 0.3641 0.0063 0.3763 0.3518
B6.A-Chr17 m 0.3133 0.0064 0.3258 0.3009
B6.A-Chr18 m 0.4324 0.0062 0.4445 0.4202
B6.A-Chr19 m 0.4056 0.0065 0.4184 0.3928
B6.A-Chr2 m 0.4129 0.0065 0.4258 0.4001
B6.A-Chr3 m 0.3247 0.006 0.3366 0.3129
B6.A-Chr4 m 0.3247 0.0062 0.3369 0.3126
B6.A-Chr5 m 0.3508 0.0062 0.3629 0.3387
B6.A-Chr6 m 0.3242 0.0062 0.3363 0.3121
B6.A-Chr7 m 0.3088 0.0065 0.3216 0.296
B6.A-Chr8 m 0.3206 0.0065 0.3334 0.3078
B6.A-Chr9 m 0.4155 0.0066 0.4285 0.4024
B6.A-ChrX m 0.4147 0.0064 0.4272 0.4023
B6.A-ChrY m 0.3539 0.0068 0.3673 0.3404
B6.A-mt m 0.3404 0.0078 0.3557 0.3252
C57BL/6J m 0.3907 0.0039 0.3984 0.3831