Project measure / variable:   Wiltshire4   Tcells_Ida_E

ID, description, units MPD:52452   Tcells_Ida_E   T cells, percent viability   [%]  dose: 100 µM  
idarubicin study
Data set, strains Wiltshire4   inbred w/CC7   35 strains     sex: m     age: 10wks
Procedure immune cell quantification
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  STRAIN COMPARISON PLOT
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Wiltshire4 - T cells, percent viability dose: 100 µM



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested35 strains
Mean of the strain means5.81   %
Median of the strain means2.31   %
SD of the strain means± 8.43
Coefficient of variation (CV)1.45
Min–max range of strain means0.347   –   38.9   %
Mean sample size per strain4.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 34 9603.219 282.4476 2.3995 0.0004
Residuals 102 12006.4713 117.7105


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 1.52 0.583   4 0.291 0.383 0.71, 1.95 -0.51
129X1/SvJ m 1.96 1.01   4 0.505 0.514 1.05, 3.4 -0.46
A/J m 9.19 10.9   4 5.45 1.19 3.34, 25.5 0.4
AKR/J m 15.7 13.3   4 6.63 0.847 2.79, 29.9 1.17
BALB/cByJ m 0.52 0.162   4 0.0809 0.311 0.37, 0.66 -0.63
BTBR T+ Itpr3tf/J m 0.78 0.851   4 0.425 1.09 0.26, 2.05 -0.6
C3H/HeJ m 4.95 1.14   4 0.571 0.231 3.41, 6.12 -0.1
C57BL/6J m 4.2 3.2   4 1.6 0.761 -0.19
C57BLKS/J m 1.16 0.467   4 0.233 0.402 0.47, 1.49 -0.55
C57BR/cdJ m 2.44 1.13   4 0.567 0.465 1.28, 3.47 -0.4
C58/J m 1.83 0.742   2   0.525 0.407 1.3, 2.35 -0.47
CBA/J m 0.81 0.217   4 0.109 0.268 0.67, 1.13 -0.59
CZECHII/EiJ m 8.41 2.69   4 1.35 0.32 4.94, 11.5 0.31
DBA/2J m 6.04 2.35   4 1.18 0.389 2.98, 8.5 0.03
FVB/NJ m 1.35 0.834   4 0.417 0.619 0.25, 2.19 -0.53
I/LnJ m 38.9 45.9   4 22.9 1.18 0.67, 93.6 3.92
KK/HlJ m 27.9 5.33   4 2.67 0.191 20.0, 31.4 2.62
LG/J m 4.74 4.5   4 2.25 0.949 2.2, 11.5 -0.13
LP/J m 7.14 4.16   4 2.08 0.583 2.06, 12.3 0.16
MA/MyJ m 1.8 1.73   4 0.864 0.961 0.64, 4.36 -0.48
NOD/ShiLtJ m 2.66 1.78   4 0.889 0.67 0.18, 4.42 -0.37
NON/ShiLtJ m 8.97 4.06   4 2.03 0.453 4.17, 13.7 0.37
NZB/BlNJ m 7.79 8.23   4 4.12 1.06 3.16, 20.1 0.24
NZO/HlLtJ m 2.31 2.49   4 1.25 1.08 0.65, 5.98 -0.41
NZW/LacJ m 1.69 0.255   4 0.128 0.151 1.34, 1.89 -0.49
PERA/EiJ m 5.76 1.47   4 0.733 0.255 4.45, 7.75 -0.01
PL/J m 1.32 0.309   4 0.155 0.234 0.94, 1.68 -0.53
PWD/PhJ m 0.762 0.582   4 0.291 0.763 0.27, 1.43 -0.6
PWK/PhJ m 1.58 0.654   4 0.327 0.414 0.73, 2.16 -0.5
RIIIS/J m 0.347 0.289   4 0.144 0.831 -0.65
SEA/GnJ m 1.17 0.57   4 0.285 0.487 0.37, 1.72 -0.55
SJL/J m 0.978 0.955   4 0.478 0.977 0.48, 2.41 -0.57
SM/J m 22.9 37.5   4 18.7 1.64 2.06, 79.0 2.03
SWR/J m 2.85 1.29   4 0.647 0.454 2.12, 4.79 -0.35
WSB/EiJ m 0.85 0.796   3 0.459 0.936 0.24, 1.75 -0.59


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 1.5225 5.4247 12.2824 0.0
129X1/SvJ m 1.965 5.4247 12.7249 0.0
A/J m 9.19 5.4247 19.9499 0.0
AKR/J m 15.67 5.4247 26.4299 4.9101
BALB/cByJ m 0.52 5.4247 11.2799 0.0
BTBR T+ Itpr3tf/J m 0.78 5.4247 11.5399 0.0
C3H/HeJ m 4.9525 5.4247 15.7124 0.0
C57BL/6J m 4.1975 5.4247 14.9574 0.0
C57BLKS/J m 1.16 5.4247 11.9199 0.0
C57BR/cdJ m 2.4375 5.4247 13.1974 0.0
C58/J m 1.825 7.6717 17.0418 0.0
CBA/J m 0.81 5.4247 11.5699 0.0
CZECHII/EiJ m 8.415 5.4247 19.1749 0.0
DBA/2J m 6.04 5.4247 16.7999 0.0
FVB/NJ m 1.3475 5.4247 12.1074 0.0
I/LnJ m 38.86 5.4247 49.6199 28.1001
KK/HlJ m 27.91 5.4247 38.6699 17.1501
LG/J m 4.74 5.4247 15.4999 0.0
LP/J m 7.1375 5.4247 17.8974 0.0
MA/MyJ m 1.8 5.4247 12.5599 0.0
NOD/ShiLtJ m 2.655 5.4247 13.4149 0.0
NON/ShiLtJ m 8.9725 5.4247 19.7324 0.0
NZB/BlNJ m 7.795 5.4247 18.5549 0.0
NZO/HlLtJ m 2.315 5.4247 13.0749 0.0
NZW/LacJ m 1.69 5.4247 12.4499 0.0
PERA/EiJ m 5.755 5.4247 16.5149 0.0
PL/J m 1.32 5.4247 12.0799 0.0
PWD/PhJ m 0.7625 5.4247 11.5224 0.0
PWK/PhJ m 1.58 5.4247 12.3399 0.0
RIIIS/J m 0.3475 5.4247 11.1074 0.0
SEA/GnJ m 1.17 5.4247 11.9299 0.0
SJL/J m 0.9775 5.4247 11.7374 0.0
SM/J m 22.89 5.4247 33.6499 12.1301
SWR/J m 2.8525 5.4247 13.6124 0.0
WSB/EiJ m 0.85 6.2639 13.2745 0.0




  GWAS USING LINEAR MIXED MODELS