Project measure / variable:   Wiltshire4   Tcells_Ida_D

ID, description, units MPD:52451   Tcells_Ida_D   T cells, percent viability   [%]  dose: 11.1 µM  
idarubicin study
Data set, strains Wiltshire4   inbred w/CC7   35 strains     sex: m     age: 10wks
Procedure immune cell quantification
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  STRAIN COMPARISON PLOT
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Wiltshire4 - T cells, percent viability dose: 11.1 µM



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested35 strains
Mean of the strain means25.8   %
Median of the strain means17.9   %
SD of the strain means± 23.2
Coefficient of variation (CV)0.901
Min–max range of strain means1.56   –   90.3   %
Mean sample size per strain3.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 34 71772.1638 2110.946 15.1259 < 0.0001
Residuals 101 14095.4327 139.5587


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 73.3 24.3   4 12.2 0.332 49.4, 103.0 2.05
129X1/SvJ m 34.8 7.32   4 3.66 0.21 29.0, 44.9 0.39
A/J m 4.34 1.56   4 0.78 0.359 2.94, 6.39 -0.92
AKR/J m 28.4 10.8   4 5.39 0.379 13.4, 39.1 0.11
BALB/cByJ m 90.3 2.2   4 1.1 0.0244 88.7, 93.5 2.78
BTBR T+ Itpr3tf/J m 15.0 9.14   3 5.28 0.608 7.05, 25.0 -0.46
C3H/HeJ m 30.5 8.61   4 4.3 0.282 19.0, 37.1 0.2
C57BL/6J m 30.8 25.7   4 12.9 0.837 13.4, 68.1 0.22
C57BLKS/J m 1.56 0.87   4 0.435 0.559 0.98, 2.85 -1.04
C57BR/cdJ m 4.95 3.48   4 1.74 0.704 2.13, 9.86 -0.9
C58/J m 2.02 0.389   2   0.275 0.192 1.75, 2.3 -1.02
CBA/J m 5.48 9.22   4 4.61 1.68 0.74, 19.3 -0.87
CZECHII/EiJ m 6.66 1.13   4 0.567 0.17 5.53, 7.7 -0.82
DBA/2J m 5.75 2.54   4 1.27 0.443 2.76, 8.1 -0.86
FVB/NJ m 41.8 15.7   4 7.85 0.376 21.7, 56.0 0.69
I/LnJ m 17.9 12.3   4 6.14 0.684 6.02, 34.9 -0.34
KK/HlJ m 87.3 2.92   4 1.46 0.0334 83.1, 89.3 2.65
LG/J m 10.8 5.24   4 2.62 0.486 4.73, 17.4 -0.65
LP/J m 11.2 3.47   4 1.74 0.309 6.06, 13.3 -0.63
MA/MyJ m 11.5 3.15   4 1.58 0.275 7.81, 14.2 -0.62
NOD/ShiLtJ m 2.84 0.444   4 0.222 0.156 2.44, 3.45 -0.99
NON/ShiLtJ m 23.5 8.19   4 4.09 0.348 13.7, 33.7 -0.1
NZB/BlNJ m 35.4 19.2   4 9.6 0.542 18.3, 59.8 0.41
NZO/HlLtJ m 12.3 8.52   4 4.26 0.692 5.35, 23.8 -0.58
NZW/LacJ m 16.6 6.38   4 3.19 0.383 9.07, 24.4 -0.4
PERA/EiJ m 2.35 0.533   4 0.267 0.227 1.93, 3.12 -1.01
PL/J m 39.8 5.65   4 2.83 0.142 35.8, 48.1 0.6
PWD/PhJ m 40.5 15.8   4 7.89 0.39 24.1, 61.6 0.63
PWK/PhJ m 5.6 1.55   4 0.776 0.277 3.43, 6.76 -0.87
RIIIS/J m 46.6 13.5   4 6.75 0.29 26.4, 54.8 0.9
SEA/GnJ m 25.5 23.1   4 11.6 0.905 6.63, 55.0 -0.01
SJL/J m 11.3 9.11   4 4.55 0.807 2.66, 19.5 -0.62
SM/J m 43.5 25.1   4 12.5 0.577 26.9, 80.8 0.76
SWR/J m 41.6 12.8   4 6.41 0.309 33.1, 60.5 0.68
WSB/EiJ m 40.6 15.2   3 8.75 0.374 25.6, 55.9 0.64


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 73.2625 5.9067 84.9799 61.5451
129X1/SvJ m 34.8275 5.9067 46.5449 23.1101
A/J m 4.3425 5.9067 16.0599 0.0
AKR/J m 28.445 5.9067 40.1624 16.7276
BALB/cByJ m 90.2625 5.9067 101.9799 78.5451
BTBR T+ Itpr3tf/J m 15.0433 6.8205 28.5734 1.5132
C3H/HeJ m 30.54 5.9067 42.2574 18.8226
C57BL/6J m 30.7525 5.9067 42.4699 19.0351
C57BLKS/J m 1.5575 5.9067 13.2749 0.0
C57BR/cdJ m 4.9475 5.9067 16.6649 0.0
C58/J m 2.025 8.3534 18.5959 0.0
CBA/J m 5.485 5.9067 17.2024 0.0
CZECHII/EiJ m 6.66 5.9067 18.3774 0.0
DBA/2J m 5.745 5.9067 17.4624 0.0
FVB/NJ m 41.78 5.9067 53.4974 30.0626
I/LnJ m 17.9475 5.9067 29.6649 6.2301
KK/HlJ m 87.3075 5.9067 99.0249 75.5901
LG/J m 10.775 5.9067 22.4924 0.0
LP/J m 11.2475 5.9067 22.9649 0.0
MA/MyJ m 11.47 5.9067 23.1874 0.0
NOD/ShiLtJ m 2.84 5.9067 14.5574 0.0
NON/ShiLtJ m 23.5225 5.9067 35.2399 11.8051
NZB/BlNJ m 35.405 5.9067 47.1224 23.6876
NZO/HlLtJ m 12.31 5.9067 24.0274 0.5926
NZW/LacJ m 16.63 5.9067 28.3474 4.9126
PERA/EiJ m 2.35 5.9067 14.0674 0.0
PL/J m 39.79 5.9067 51.5074 28.0726
PWD/PhJ m 40.48 5.9067 52.1974 28.7626
PWK/PhJ m 5.605 5.9067 17.3224 0.0
RIIIS/J m 46.57 5.9067 58.2874 34.8526
SEA/GnJ m 25.535 5.9067 37.2524 13.8176
SJL/J m 11.29 5.9067 23.0074 0.0
SM/J m 43.455 5.9067 55.1724 31.7376
SWR/J m 41.57 5.9067 53.2874 29.8526
WSB/EiJ m 40.58 6.8205 54.1101 27.0499




  GWAS USING LINEAR MIXED MODELS