Project measure / variable:   Wiltshire4   Tcells_Ida_B

ID, description, units MPD:52449   Tcells_Ida_B   T cells, percent viability   [%]  dose: 0.137 µM  
idarubicin study
Data set, strains Wiltshire4   inbred w/CC7   35 strains     sex: m     age: 10wks
Procedure immune cell quantification
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  STRAIN COMPARISON PLOT
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Wiltshire4 - T cells, percent viability dose: 0.137 µM



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested35 strains
Mean of the strain means97.8   %
Median of the strain means98.0   %
SD of the strain means± 3.93
Coefficient of variation (CV)0.0402
Min–max range of strain means88.1   –   110   %
Mean sample size per strain3.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 34 1940.4343 57.0716 2.4571 0.0003
Residuals 101 2345.9104 23.2268


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 104.0 6.21   4 3.11 0.0595 98.4, 110.0 1.59
129X1/SvJ m 94.9 5.73   4 2.87 0.0604 90.3, 103.0 -0.73
A/J m 97.5 4.73   4 2.37 0.0485 92.4, 103.0 -0.07
AKR/J m 100.0 1.53   4 0.767 0.0153 98.1, 102.0 0.57
BALB/cByJ m 100.0 1.55   4 0.774 0.0154 99.5, 103.0 0.57
BTBR T+ Itpr3tf/J m 98.1 2.63   3 1.52 0.0268 95.2, 100.0 0.08
C3H/HeJ m 99.5 0.33   4 0.165 0.00332 99.2, 99.9 0.44
C57BL/6J m 99.1 0.66   4 0.33 0.00666 98.1, 99.5 0.34
C57BLKS/J m 91.4 2.08   4 1.04 0.0228 89.5, 94.3 -1.62
C57BR/cdJ m 96.9 1.77   4 0.883 0.0182 94.5, 98.7 -0.22
C58/J m 96.6 1.23   2   0.87 0.0127 95.7, 97.5 -0.3
CBA/J m 96.1 1.29   4 0.647 0.0135 94.5, 97.3 -0.43
CZECHII/EiJ m 98.0 1.17   4 0.584 0.0119 96.9, 99.6 0.06
DBA/2J m 98.7 2.81   4 1.41 0.0285 94.6, 101.0 0.24
FVB/NJ m 98.8 1.06   4 0.53 0.0107 97.4, 99.8 0.26
I/LnJ m 96.3 3.62   4 1.81 0.0376 91.5, 100.0 -0.37
KK/HlJ m 98.8 2.43   4 1.21 0.0246 95.6, 101.0 0.26
LG/J m 93.4 1.83   4 0.914 0.0196 90.9, 94.8 -1.11
LP/J m 96.9 0.533   4 0.266 0.0055 96.5, 97.7 -0.22
MA/MyJ m 98.3 2.05   4 1.02 0.0208 95.3, 99.6 0.13
NOD/ShiLtJ m 98.0 3.18   4 1.59 0.0325 94.8, 102.0 0.06
NON/ShiLtJ m 88.1 20.3   4 10.1 0.23 58.4, 103.0 -2.46
NZB/BlNJ m 99.0 0.417   4 0.208 0.00421 98.4, 99.3 0.31
NZO/HlLtJ m 92.2 5.98   4 2.99 0.0648 84.1, 98.2 -1.42
NZW/LacJ m 97.4 0.693   4 0.346 0.00711 96.6, 98.3 -0.09
PERA/EiJ m 91.2 7.54   4 3.77 0.0827 82.0, 97.7 -1.67
PL/J m 99.3 1.0   4 0.501 0.0101 98.0, 100.0 0.39
PWD/PhJ m 103.0 0.399   4 0.199 0.00388 103.0, 103.0 1.33
PWK/PhJ m 96.9 7.3   4 3.65 0.0754 86.7, 103.0 -0.22
RIIIS/J m 104.0 1.19   4 0.597 0.0115 102.0, 104.0 1.59
SEA/GnJ m 98.7 1.76   4 0.878 0.0178 96.5, 101.0 0.24
SJL/J m 97.1 4.24   4 2.12 0.0436 90.8, 99.8 -0.17
SM/J m 96.5 3.81   4 1.91 0.0395 91.3, 100.0 -0.32
SWR/J m 97.3 0.935   4 0.467 0.00961 96.7, 98.7 -0.12
WSB/EiJ m 110.0 5.98   3 3.46 0.0545 103.0, 114.0 3.11


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 104.385 2.4097 109.1652 99.6048
129X1/SvJ m 94.87 2.4097 99.6502 90.0898
A/J m 97.53 2.4097 102.3102 92.7498
AKR/J m 100.1525 2.4097 104.9327 95.3723
BALB/cByJ m 100.4175 2.4097 105.1977 95.6373
BTBR T+ Itpr3tf/J m 98.14 2.7825 103.6597 92.6203
C3H/HeJ m 99.545 2.4097 104.3252 94.7648
C57BL/6J m 99.0925 2.4097 103.8727 94.3123
C57BLKS/J m 91.415 2.4097 96.1952 86.6348
C57BR/cdJ m 96.88 2.4097 101.6602 92.0998
C58/J m 96.58 3.4078 103.3403 89.8197
CBA/J m 96.0575 2.4097 100.8377 91.2773
CZECHII/EiJ m 97.975 2.4097 102.7552 93.1948
DBA/2J m 98.695 2.4097 103.4752 93.9148
FVB/NJ m 98.7575 2.4097 103.5377 93.9773
I/LnJ m 96.275 2.4097 101.0552 91.4948
KK/HlJ m 98.7775 2.4097 103.5577 93.9973
LG/J m 93.4025 2.4097 98.1827 88.6223
LP/J m 96.935 2.4097 101.7152 92.1548
MA/MyJ m 98.3425 2.4097 103.1227 93.5623
NOD/ShiLtJ m 97.9875 2.4097 102.7677 93.2073
NON/ShiLtJ m 88.1125 2.4097 92.8927 83.3323
NZB/BlNJ m 98.97 2.4097 103.7502 94.1898
NZO/HlLtJ m 92.2025 2.4097 96.9827 87.4223
NZW/LacJ m 97.4075 2.4097 102.1877 92.6273
PERA/EiJ m 91.225 2.4097 96.0052 86.4448
PL/J m 99.3225 2.4097 104.1027 94.5423
PWD/PhJ m 102.8925 2.4097 107.6727 98.1123
PWK/PhJ m 96.8525 2.4097 101.6327 92.0723
RIIIS/J m 103.6025 2.4097 108.3827 98.8223
SEA/GnJ m 98.695 2.4097 103.4752 93.9148
SJL/J m 97.145 2.4097 101.9252 92.3648
SM/J m 96.4875 2.4097 101.2677 91.7073
SWR/J m 97.275 2.4097 102.0552 92.4948
WSB/EiJ m 109.8767 2.7825 115.3964 104.3569




  GWAS USING LINEAR MIXED MODELS