Project measure / variable:   Wiltshire4   Tcells_Ida_A

ID, description, units MPD:52448   Tcells_Ida_A   T cells, percent viability   [%]  dose: 0.046 µM  
idarubicin study
Data set, strains Wiltshire4   inbred w/CC7   35 strains     sex: m     age: 10wks
Procedure immune cell quantification
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  STRAIN COMPARISON PLOT
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Wiltshire4 - T cells, percent viability dose: 0.046 µM



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested35 strains
Mean of the strain means99.4   %
Median of the strain means99.3   %
SD of the strain means± 2.62
Coefficient of variation (CV)0.0264
Min–max range of strain means94.1   –   107   %
Mean sample size per strain3.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 34 861.1992 25.3294 1.8068 0.0125
Residuals 101 1415.9205 14.019


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 101.0 7.1   4 3.55 0.0701 95.0, 108.0 0.61
129X1/SvJ m 98.3 4.98   4 2.49 0.0507 93.5, 105.0 -0.42
A/J m 97.9 1.51   4 0.754 0.0154 96.7, 99.9 -0.58
AKR/J m 100.0 2.05   4 1.02 0.0204 97.5, 102.0 0.22
BALB/cByJ m 99.7 1.28   4 0.641 0.0129 97.8, 101.0 0.11
BTBR T+ Itpr3tf/J m 99.3 3.18   3 1.84 0.032 95.6, 101.0 -0.04
C3H/HeJ m 99.5 0.33   4 0.165 0.00332 99.1, 99.9 0.03
C57BL/6J m 99.5 0.977   4 0.488 0.00981 98.5, 100.0 0.03
C57BLKS/J m 94.5 2.98   4 1.49 0.0315 91.6, 98.5 -1.87
C57BR/cdJ m 98.2 1.69   4 0.846 0.0172 96.2, 100.0 -0.46
C58/J m 99.3 0.997   2   0.705 0.01 98.6, 100.0 -0.04
CBA/J m 98.1 1.77   4 0.886 0.0181 96.1, 100.0 -0.5
CZECHII/EiJ m 101.0 2.51   4 1.25 0.0249 97.9, 103.0 0.61
DBA/2J m 101.0 2.8   4 1.4 0.0277 97.5, 103.0 0.61
FVB/NJ m 98.9 0.729   4 0.364 0.00737 98.3, 100.0 -0.19
I/LnJ m 99.9 1.94   4 0.969 0.0194 97.0, 101.0 0.19
KK/HlJ m 99.1 3.14   4 1.57 0.0317 94.6, 102.0 -0.12
LG/J m 99.8 7.51   4 3.76 0.0753 88.8, 106.0 0.15
LP/J m 98.5 1.78   4 0.888 0.018 96.5, 101.0 -0.35
MA/MyJ m 98.8 2.33   4 1.17 0.0236 95.3, 100.0 -0.23
NOD/ShiLtJ m 99.1 2.5   4 1.25 0.0252 96.7, 101.0 -0.12
NON/ShiLtJ m 101.0 4.89   4 2.44 0.0486 94.4, 106.0 0.61
NZB/BlNJ m 99.8 0.271   4 0.135 0.00271 99.5, 100.0 0.15
NZO/HlLtJ m 99.4 4.86   4 2.43 0.0489 92.8, 104.0 0.0
NZW/LacJ m 95.8 5.18   4 2.59 0.0541 88.8, 101.0 -1.38
PERA/EiJ m 94.1 8.62   4 4.31 0.0916 86.4, 102.0 -2.02
PL/J m 99.6 1.46   4 0.731 0.0147 97.4, 100.0 0.07
PWD/PhJ m 104.0 2.27   4 1.13 0.0217 102.0, 107.0 1.75
PWK/PhJ m 96.8 4.53   4 2.27 0.0468 90.8, 102.0 -1.0
RIIIS/J m 107.0 3.95   4 1.97 0.037 102.0, 111.0 2.89
SEA/GnJ m 99.1 1.1   4 0.55 0.0111 98.2, 101.0 -0.12
SJL/J m 97.3 5.37   4 2.69 0.0552 92.5, 103.0 -0.8
SM/J m 98.4 2.4   4 1.2 0.0244 95.6, 101.0 -0.39
SWR/J m 98.7 1.43   4 0.715 0.0145 96.7, 100.0 -0.27
WSB/EiJ m 107.0 7.36   3 4.25 0.0688 99.8, 115.0 2.89


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 101.185 1.8721 104.8987 97.4713
129X1/SvJ m 98.28 1.8721 101.9937 94.5663
A/J m 97.945 1.8721 101.6587 94.2313
AKR/J m 100.2325 1.8721 103.9462 96.5188
BALB/cByJ m 99.6875 1.8721 103.4012 95.9738
BTBR T+ Itpr3tf/J m 99.27 2.1617 103.5583 94.9817
C3H/HeJ m 99.545 1.8721 103.2587 95.8313
C57BL/6J m 99.5475 1.8721 103.2612 95.8338
C57BLKS/J m 94.5275 1.8721 98.2412 90.8138
C57BR/cdJ m 98.1775 1.8721 101.8912 94.4638
C58/J m 99.345 2.6475 104.597 94.093
CBA/J m 98.115 1.8721 101.8287 94.4013
CZECHII/EiJ m 100.5925 1.8721 104.3062 96.8788
DBA/2J m 100.9225 1.8721 104.6362 97.2088
FVB/NJ m 98.885 1.8721 102.5987 95.1713
I/LnJ m 99.9225 1.8721 103.6362 96.2088
KK/HlJ m 99.1 1.8721 102.8137 95.3863
LG/J m 99.8125 1.8721 103.5262 96.0988
LP/J m 98.49 1.8721 102.2037 94.7763
MA/MyJ m 98.795 1.8721 102.5087 95.0813
NOD/ShiLtJ m 99.08 1.8721 102.7937 95.3663
NON/ShiLtJ m 100.5375 1.8721 104.2512 96.8238
NZB/BlNJ m 99.85 1.8721 103.5637 96.1363
NZO/HlLtJ m 99.39 1.8721 103.1037 95.6763
NZW/LacJ m 95.8425 1.8721 99.5562 92.1288
PERA/EiJ m 94.1075 1.8721 97.8212 90.3938
PL/J m 99.55 1.8721 103.2637 95.8363
PWD/PhJ m 104.5 1.8721 108.2137 100.7863
PWK/PhJ m 96.7975 1.8721 100.5112 93.0838
RIIIS/J m 106.615 1.8721 110.3287 102.9013
SEA/GnJ m 99.1125 1.8721 102.8262 95.3988
SJL/J m 97.3325 1.8721 101.0462 93.6188
SM/J m 98.44 1.8721 102.1537 94.7263
SWR/J m 98.74 1.8721 102.4537 95.0263
WSB/EiJ m 106.93 2.1617 111.2183 102.6417




  GWAS USING LINEAR MIXED MODELS