Project measure / variable:   Wiltshire4   Bcells_Ida_E

ID, description, units MPD:52446   Bcells_Ida_E   B cells, percent viability   [%]  dose: 100 µM  
idarubicin study
Data set, strains Wiltshire4   inbred w/CC7   35 strains     sex: m     age: 10wks
Procedure immune cell quantification
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  STRAIN COMPARISON PLOT
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Wiltshire4 - B cells, percent viability dose: 100 µM



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested35 strains
Mean of the strain means2.24   %
Median of the strain means0.930   %
SD of the strain means± 4.17
Coefficient of variation (CV)1.86
Min–max range of strain means0   –   23.8   %
Mean sample size per strain4.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 34 2360.7438 69.4336 1.6537 0.0284
Residuals 102 4282.6033 41.9863


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 0.823 0.215   4 0.108 0.262 0.59, 1.1 -0.34
129X1/SvJ m 3.73 3.14   4 1.57 0.844 1.81, 8.42 0.36
A/J m 1.41 1.08   4 0.539 0.764 0.48, 2.51 -0.2
AKR/J m 7.89 6.32   4 3.16 0.802 1.42, 15.6 1.36
BALB/cByJ m 0.688 0.332   4 0.166 0.483 0.29, 1.03 -0.37
BTBR T+ Itpr3tf/J m 0.315 0.116   4 0.0581 0.369 0.16, 0.43 -0.46
C3H/HeJ m 0.155 0.126   4 0.0628 0.81 0.05, 0.33 -0.5
C57BL/6J m 0.315 0.198   4 0.0988 0.627 0.13, 0.59 -0.46
C57BLKS/J m 0.98 0.443   4 0.222 0.452 0.58, 1.61 -0.3
C57BR/cdJ m 0.315 0.0915   4 0.0457 0.29 0.22, 0.42 -0.46
C58/J m 0.385 0.233   2   0.165 0.606 0.22, 0.55 -0.44
CBA/J m 0.93 0.223   4 0.112 0.24 0.63, 1.17 -0.31
CZECHII/EiJ m 0.515 0.292   4 0.146 0.568 0.32, 0.95 -0.41
DBA/2J m 2.1 2.45   4 1.22 1.17 0.43, 5.73 -0.03
FVB/NJ m 0.625 0.183   4 0.0917 0.293 0.41, 0.81 -0.39
I/LnJ m 23.8 35.5   4 17.7 1.49 0.23, 75.8 5.17
KK/HlJ m 0.0 0.0   4 0.0 0.0 -0.54
LG/J m 0.285 0.259   4 0.13 0.91 -0.47
LP/J m 0.05 0.044   4 0.022 0.879 -0.52
MA/MyJ m 0.128 0.0556   4 0.0278 0.436 0.05, 0.18 -0.51
NOD/ShiLtJ m 1.15 0.324   4 0.162 0.283 0.85, 1.44 -0.26
NON/ShiLtJ m 4.86 5.57   4 2.78 1.15 0.28, 12.8 0.63
NZB/BlNJ m 1.09 1.69   4 0.844 1.54 0.16, 3.62 -0.28
NZO/HlLtJ m 2.42 4.16   4 2.08 1.72 0.11, 8.66 0.04
NZW/LacJ m 0.37 0.156   4 0.0779 0.421 0.19, 0.51 -0.45
PERA/EiJ m 2.06 0.942   4 0.471 0.458 1.07, 2.98 -0.04
PL/J m 1.49 0.602   4 0.301 0.404 0.63, 2.02 -0.18
PWD/PhJ m 6.17 2.45   4 1.22 0.397 3.99, 9.67 0.94
PWK/PhJ m 0.613 0.187   4 0.0934 0.305 0.44, 0.87 -0.39
RIIIS/J m 2.17 1.1   4 0.551 0.508 0.87, 3.52 -0.02
SEA/GnJ m 0.522 0.123   4 0.0617 0.236 0.38, 0.68 -0.41
SJL/J m 1.98 2.88   4 1.44 1.46 0.49, 6.29 -0.06
SM/J m 4.35 6.2   4 3.1 1.42 1.1, 13.7 0.51
SWR/J m 0.867 1.02   4 0.512 1.18 0.11, 2.36 -0.33
WSB/EiJ m 2.74 2.62   3 1.52 0.957 1.1, 5.77 0.12


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 0.8225 3.2398 7.2487 -5.6037
129X1/SvJ m 3.725 3.2398 10.1512 -2.7012
A/J m 1.41 3.2398 7.8362 -5.0162
AKR/J m 7.8875 3.2398 14.3137 1.4613
BALB/cByJ m 0.6875 3.2398 7.1137 -5.7387
BTBR T+ Itpr3tf/J m 0.315 3.2398 6.7412 -6.1112
C3H/HeJ m 0.155 3.2398 6.5812 -6.2712
C57BL/6J m 0.315 3.2398 6.7412 -6.1112
C57BLKS/J m 0.98 3.2398 7.4062 -5.4462
C57BR/cdJ m 0.315 3.2398 6.7412 -6.1112
C58/J m 0.385 4.5818 9.473 -8.703
CBA/J m 0.93 3.2398 7.3562 -5.4962
CZECHII/EiJ m 0.515 3.2398 6.9412 -5.9112
DBA/2J m 2.0975 3.2398 8.5237 -4.3287
FVB/NJ m 0.625 3.2398 7.0512 -5.8012
I/LnJ m 23.82 3.2398 30.2462 17.3938
KK/HlJ m 0.0 3.2398 6.4262 -6.4262
LG/J m 0.285 3.2398 6.7112 -6.1412
LP/J m 0.05 3.2398 6.4762 -6.3762
MA/MyJ m 0.1275 3.2398 6.5537 -6.2987
NOD/ShiLtJ m 1.145 3.2398 7.5712 -5.2812
NON/ShiLtJ m 4.8575 3.2398 11.2837 -1.5687
NZB/BlNJ m 1.0925 3.2398 7.5187 -5.3337
NZO/HlLtJ m 2.42 3.2398 8.8462 -4.0062
NZW/LacJ m 0.37 3.2398 6.7962 -6.0562
PERA/EiJ m 2.055 3.2398 8.4812 -4.3712
PL/J m 1.4925 3.2398 7.9187 -4.9337
PWD/PhJ m 6.165 3.2398 12.5912 -0.2612
PWK/PhJ m 0.6125 3.2398 7.0387 -5.8137
RIIIS/J m 2.1725 3.2398 8.5987 -4.2537
SEA/GnJ m 0.5225 3.2398 6.9487 -5.9037
SJL/J m 1.975 3.2398 8.4012 -4.4512
SM/J m 4.3525 3.2398 10.7787 -2.0737
SWR/J m 0.8675 3.2398 7.2937 -5.5587
WSB/EiJ m 2.7433 3.741 10.1637 -4.677




  GWAS USING LINEAR MIXED MODELS