Project measure / variable:   Wiltshire4   Bcells_Ida_C

ID, description, units MPD:52444   Bcells_Ida_C   B cells, percent viability   [%]  dose: 1.235 µM  
idarubicin study
Data set, strains Wiltshire4   inbred w/CC7   35 strains     sex: m     age: 10wks
Procedure immune cell quantification
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  STRAIN COMPARISON PLOT
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Wiltshire4 - B cells, percent viability dose: 1.235 µM



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested35 strains
Mean of the strain means45.0   %
Median of the strain means40.9   %
SD of the strain means± 27.4
Coefficient of variation (CV)0.609
Min–max range of strain means5.02   –   103   %
Mean sample size per strain3.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 34 95273.8539 2802.1722 5.4688 < 0.0001
Residuals 101 51751.4409 512.3905


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 90.2 50.9   4 25.4 0.564 21.9, 144.0 1.65
129X1/SvJ m 56.5 5.98   4 2.99 0.106 51.2, 62.1 0.42
A/J m 51.3 13.0   4 6.48 0.253 32.9, 61.9 0.23
AKR/J m 76.2 8.17   4 4.09 0.107 68.8, 84.5 1.14
BALB/cByJ m 78.1 15.8   4 7.91 0.203 60.7, 95.9 1.21
BTBR T+ Itpr3tf/J m 26.8 12.7   3 7.33 0.474 12.6, 37.0 -0.67
C3H/HeJ m 47.9 12.0   4 6.0 0.25 35.7, 62.8 0.1
C57BL/6J m 40.7 15.2   4 7.59 0.373 20.9, 56.3 -0.16
C57BLKS/J m 6.6 2.16   4 1.08 0.327 4.34, 9.0 -1.4
C57BR/cdJ m 11.7 5.89   4 2.95 0.504 3.89, 18.1 -1.22
C58/J m 5.02 1.26   2   0.89 0.251 4.13, 5.91 -1.46
CBA/J m 13.9 2.26   4 1.13 0.163 12.2, 17.2 -1.14
CZECHII/EiJ m 35.1 9.14   4 4.57 0.26 26.4, 47.8 -0.36
DBA/2J m 48.0 54.4   4 27.2 1.13 19.2, 130.0 0.11
FVB/NJ m 35.4 5.5   4 2.75 0.155 29.6, 41.2 -0.35
I/LnJ m 17.8 16.8   4 8.39 0.945 6.97, 42.8 -0.99
KK/HlJ m 73.5 52.9   4 26.4 0.72 1.04
LG/J m 30.1 11.6   4 5.82 0.386 17.0, 40.1 -0.55
LP/J m 14.5 5.83   4 2.92 0.402 7.48, 21.8 -1.11
MA/MyJ m 36.4 24.4   4 12.2 0.672 14.7, 59.5 -0.32
NOD/ShiLtJ m 20.1 7.46   4 3.73 0.37 12.3, 28.5 -0.91
NON/ShiLtJ m 67.9 10.2   4 5.12 0.151 54.7, 78.7 0.83
NZB/BlNJ m 40.9 6.57   4 3.28 0.16 33.2, 48.7 -0.15
NZO/HlLtJ m 12.4 5.98   4 2.99 0.484 6.44, 19.3 -1.19
NZW/LacJ m 58.1 9.72   4 4.86 0.167 46.0, 68.1 0.48
PERA/EiJ m 19.3 5.21   4 2.6 0.269 14.6, 26.4 -0.94
PL/J m 54.4 16.6   4 8.3 0.305 33.4, 73.2 0.34
PWD/PhJ m 103.0 61.1   4 30.5 0.595 53.8, 191.0 2.11
PWK/PhJ m 86.2 5.82   4 2.91 0.0675 79.1, 91.6 1.5
RIIIS/J m 59.8 23.2   4 11.6 0.389 39.0, 91.9 0.54
SEA/GnJ m 60.3 27.1   4 13.5 0.449 29.1, 84.6 0.56
SJL/J m 23.0 28.5   4 14.3 1.24 7.99, 65.8 -0.8
SM/J m 48.4 9.57   4 4.78 0.198 37.5, 59.0 0.12
SWR/J m 25.2 5.68   4 2.84 0.226 16.9, 29.4 -0.72
WSB/EiJ m 102.0 11.2   3 6.45 0.11 92.4, 114.0 2.08


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 90.1875 11.318 112.6394 67.7356
129X1/SvJ m 56.5125 11.318 78.9644 34.0606
A/J m 51.3025 11.318 73.7544 28.8506
AKR/J m 76.21 11.318 98.6619 53.7581
BALB/cByJ m 78.0925 11.318 100.5444 55.6406
BTBR T+ Itpr3tf/J m 26.7967 13.0689 52.7219 0.8714
C3H/HeJ m 47.92 11.318 70.3719 25.4681
C57BL/6J m 40.695 11.318 63.1469 18.2431
C57BLKS/J m 6.605 11.318 29.0569 0.0
C57BR/cdJ m 11.6925 11.318 34.1444 0.0
C58/J m 5.02 16.0061 36.7718 0.0
CBA/J m 13.8775 11.318 36.3294 0.0
CZECHII/EiJ m 35.13 11.318 57.5819 12.6781
DBA/2J m 47.96 11.318 70.4119 25.5081
FVB/NJ m 35.42 11.318 57.8719 12.9681
I/LnJ m 17.755 11.318 40.2069 0.0
KK/HlJ m 73.5075 11.318 95.9594 51.0556
LG/J m 30.115 11.318 52.5669 7.6631
LP/J m 14.505 11.318 36.9569 0.0
MA/MyJ m 36.37 11.318 58.8219 13.9181
NOD/ShiLtJ m 20.135 11.318 42.5869 0.0
NON/ShiLtJ m 67.915 11.318 90.3669 45.4631
NZB/BlNJ m 40.9075 11.318 63.3594 18.4556
NZO/HlLtJ m 12.3525 11.318 34.8044 0.0
NZW/LacJ m 58.1275 11.318 80.5794 35.6756
PERA/EiJ m 19.325 11.318 41.7769 0.0
PL/J m 54.4375 11.318 76.8894 31.9856
PWD/PhJ m 102.66 11.318 125.1119 80.2081
PWK/PhJ m 86.2075 11.318 108.6594 63.7556
RIIIS/J m 59.7825 11.318 82.2344 37.3306
SEA/GnJ m 60.3425 11.318 82.7944 37.8906
SJL/J m 23.04 11.318 45.4919 0.5881
SM/J m 48.38 11.318 70.8319 25.9281
SWR/J m 25.1625 11.318 47.6144 2.7106
WSB/EiJ m 101.8367 13.0689 127.7619 75.9114




  GWAS USING LINEAR MIXED MODELS