Project measure / variable:   Tarantino2   OFT_vertical_ctrl

ID, description, units MPD:50611   OFT_vertical_ctrl   number of vertical movements, 10 min teste   [n]  control  
ovariectomy study
Data set, strains Tarantino2   inbred   37 strains     sex: f     age: 10-12wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Tarantino2 - number of vertical movements, 10 min teste control



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested37 strains
Mean of the strain means65.9   n
Median of the strain means64.5   n
SD of the strain means± 30.5
Coefficient of variation (CV)0.463
Min–max range of strain means3.70   –   118   n
Mean sample size per strain9.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 36 324963.1276 9026.7535 16.3606 < 0.0001
Residuals 316 174349.388 551.7386


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 3.7 4.3   10 1.36 1.16 -2.04
A/J f 9.0 8.34   11 2.52 0.927 -1.86
AKR/J f 52.3 23.2   11 7.0 0.444 16.0, 94.0 -0.44
BALB/cByJ f 44.4 24.0   11 7.25 0.542 12.0, 79.0 -0.7
BTBR T+ Itpr3tf/J f 38.0 18.1   11 5.44 0.475 18.0, 66.0 -0.91
C3H/HeJ f 45.7 19.1   11 5.76 0.418 20.0, 80.0 -0.66
C57BL/6J f 76.5 17.1   20 3.83 0.224 52.0, 122.0 0.35
C57BR/cdJ f 96.8 23.0   6 9.39 0.237 66.0, 126.0 1.01
C57L/J f 76.0 21.6   11 6.5 0.284 22.0, 96.0 0.33
C58/J f 76.4 40.9   10 12.9 0.535 0.35
CBA/J f 16.1 16.4   11 4.96 1.02 -1.63
CZECHII/EiJ f 49.8 8.53   5 3.81 0.171 41.0, 64.0 -0.53
DBA/2J f 21.6 9.15   9 3.05 0.425 7.0, 33.0 -1.45
FVB/NJ f 109.0 11.8   10 3.74 0.108 89.0, 123.0 1.41
I/LnJ f 52.1 14.0   12 4.05 0.269 31.0, 75.0 -0.45
KK/HlJ f 55.3 38.8   6 15.8 0.701 -0.35
LG/J f 109.0 44.7   10 14.2 0.41 27.0, 146.0 1.41
LP/J f 26.3 13.7   9 4.56 0.52 1.0, 38.0 -1.3
MA/MyJ f 118.0 46.3   9 15.4 0.393 1.71
MOLF/EiJ f 93.6 7.81   7 2.95 0.0834 82.0, 102.0 0.91
MRL/MpJ f 63.1 34.3   10 10.9 0.544 16.0, 107.0 -0.09
NOD/ShiLtJ f 85.2 23.7   10 7.48 0.278 35.0, 120.0 0.63
NON/ShiLtJ f 88.9 29.6   12 8.56 0.333 49.0, 130.0 0.75
NOR/LtJ f 67.8 31.3   12 9.04 0.462 14.0, 120.0 0.06
NZO/HlLtJ f 36.0 16.0   7 6.03 0.443 5.0, 53.0 -0.98
NZW/LacJ f 55.2 16.0   10 5.07 0.291 30.0, 77.0 -0.35
PERA/EiJ f 71.8 19.4   8 6.87 0.271 46.0, 112.0 0.19
P/J f 95.8 22.6   8 7.99 0.236 64.0, 130.0 0.98
PL/J f 102.0 19.8   10 6.26 0.195 64.0, 128.0 1.18
PWD/PhJ f 51.5 17.4   6 7.08 0.337 32.0, 78.0 -0.47
RIIIS/J f 93.5 17.4   6 7.11 0.186 61.0, 108.0 0.91
SEA/GnJ f 63.8 32.4   6 13.2 0.508 31.0, 117.0 -0.07
SJL/J f 64.5 19.9   10 6.28 0.308 48.0, 114.0 -0.04
SM/J f 34.8 14.4   12 4.16 0.415 10.0, 55.0 -1.02
SWR/J f 112.0 9.15   12 2.64 0.0813 96.0, 127.0 1.51
WSB/EiJ f 83.8 38.0   8 13.4 0.454 0.59
ZALENDE/EiJ f 97.5 14.3   6 5.84 0.147 82.0, 118.0 1.04


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 3.7 7.4279 18.3144 0.0
A/J f 9.0 7.0822 22.9343 0.0
AKR/J f 52.2727 7.0822 66.207 38.3384
BALB/cByJ f 44.3636 7.0822 58.2979 30.4293
BTBR T+ Itpr3tf/J f 38.0 7.0822 51.9343 24.0657
C3H/HeJ f 45.7273 7.0822 59.6616 31.793
C57BL/6J f 76.5 5.2523 86.8339 66.1661
C57BR/cdJ f 96.8333 9.5894 115.7005 77.9662
C57L/J f 76.0 7.0822 89.9343 62.0657
C58/J f 76.4 7.4279 91.0144 61.7856
CBA/J f 16.0909 7.0822 30.0252 2.1566
CZECHII/EiJ f 49.8 10.5047 70.4679 29.1321
DBA/2J f 21.5556 7.8297 36.9605 6.1506
FVB/NJ f 109.3 7.4279 123.9144 94.6856
I/LnJ f 52.0833 6.7807 65.4244 38.7423
KK/HlJ f 55.3333 9.5894 74.2005 36.4662
LG/J f 109.1 7.4279 123.7144 94.4856
LP/J f 26.3333 7.8297 41.7383 10.9284
MA/MyJ f 118.0 7.8297 133.4049 102.5951
MOLF/EiJ f 93.5714 8.8781 111.039 76.1039
MRL/MpJ f 63.1 7.4279 77.7144 48.4856
NOD/ShiLtJ f 85.2 7.4279 99.8144 70.5856
NON/ShiLtJ f 88.9167 6.7807 102.2577 75.5756
NOR/LtJ f 67.75 6.7807 81.0911 54.4089
NZO/HlLtJ f 36.0 8.8781 53.4676 18.5324
NZW/LacJ f 55.2 7.4279 69.8144 40.5856
PERA/EiJ f 71.75 8.3047 88.0894 55.4106
P/J f 95.75 8.3047 112.0894 79.4106
PL/J f 101.6 7.4279 116.2144 86.9856
PWD/PhJ f 51.5 9.5894 70.3671 32.6329
RIIIS/J f 93.5 9.5894 112.3671 74.6329
SEA/GnJ f 63.8333 9.5894 82.7005 44.9662
SJL/J f 64.5 7.4279 79.1144 49.8856
SM/J f 34.75 6.7807 48.0911 21.4089
SWR/J f 112.5 6.7807 125.8411 99.1589
WSB/EiJ f 83.75 8.3047 100.0894 67.4106
ZALENDE/EiJ f 97.5 9.5894 116.3671 78.6329




  GWAS USING LINEAR MIXED MODELS