Phenotype measure:   Tarantino2   OFT_movement_trt



  STRAIN COMPARISON PLOT
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Tarantino2 - time spent mobile, 10 min test ovariectomy



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested37 strains
Mean of the strain means181   s
Median of the strain means198   s
SD of the strain means± 59.5
Coefficient of variation (CV)0.328
Min–max range of strain means53.6   –   289   s
Mean sample size per strain9.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 36 1143346.4781 31759.6244 17.606 < 0.0001
Residuals 307 553801.114 1803.9124


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 84.6 51.9   9 17.3 0.614 2.7, 150.0 -1.63
A/J f 53.6 30.4   10 9.62 0.567 19.7, 107.0 -2.15
AKR/J f 239.0 45.8   10 14.5 0.192 169.0, 299.0 0.97
BALB/cByJ f 144.0 72.1   13 20.0 0.5 16.0, 219.0 -0.63
BTBR T+ Itpr3tf/J f 225.0 56.1   9 18.7 0.25 127.0, 315.0 0.73
C3H/HeJ f 129.0 27.9   9 9.29 0.217 97.3, 190.0 -0.88
C57BL/6J f 208.0 54.1   18 12.7 0.26 62.5, 308.0 0.45
C57BR/cdJ f 288.0 36.5   6 14.9 0.127 235.0, 329.0 1.79
C57L/J f 203.0 48.9   7 18.5 0.24 131.0, 254.0 0.36
C58/J f 259.0 53.8   10 17.0 0.208 138.0, 328.0 1.3
CBA/J f 110.0 45.5   14 12.2 0.413 23.3, 189.0 -1.2
CZECHII/EiJ f 135.0 23.9   5 10.7 0.178 106.0, 167.0 -0.78
DBA/2J f 79.4 48.8   12 14.1 0.614 12.8, 163.0 -1.72
FVB/NJ f 199.0 17.6   10 5.56 0.0881 176.0, 228.0 0.3
I/LnJ f 216.0 45.9   13 12.7 0.212 136.0, 283.0 0.58
KK/HlJ f 144.0 53.7   9 17.9 0.372 94.0, 235.0 -0.63
LG/J f 210.0 56.4   10 17.8 0.268 68.8, 269.0 0.48
LP/J f 122.0 30.9   8 10.9 0.253 92.3, 192.0 -1.0
MA/MyJ f 289.0 44.2   7 16.7 0.153 221.0, 368.0 1.81
MOLF/EiJ f 171.0 44.4   7 16.8 0.26 118.0, 238.0 -0.18
MRL/MpJ f 198.0 19.6   10 6.21 0.0992 161.0, 229.0 0.28
NOD/ShiLtJ f 243.0 37.5   11 11.3 0.154 190.0, 304.0 1.04
NON/ShiLtJ f 222.0 39.8   12 11.5 0.179 160.0, 295.0 0.68
NOR/LtJ f 230.0 34.1   10 10.8 0.148 172.0, 281.0 0.82
NZO/HlLtJ f 71.6 33.1   7 12.5 0.463 24.7, 126.0 -1.85
NZW/LacJ f 146.0 23.0   10 7.27 0.158 107.0, 183.0 -0.6
PERA/EiJ f 133.0 22.7   8 8.03 0.171 105.0, 164.0 -0.81
P/J f 200.0 30.4   8 10.7 0.152 151.0, 236.0 0.31
PL/J f 229.0 31.9   9 10.6 0.139 176.0, 275.0 0.8
PWD/PhJ f 152.0 11.6   5 5.18 0.0762 139.0, 165.0 -0.49
RIIIS/J f 222.0 17.6   7 6.67 0.0794 201.0, 250.0 0.68
SEA/GnJ f 153.0 56.8   7 21.5 0.371 66.6, 239.0 -0.48
SJL/J f 158.0 45.4   10 14.4 0.288 75.6, 229.0 -0.39
SM/J f 221.0 37.7   9 12.6 0.17 165.0, 280.0 0.67
SWR/J f 176.0 27.7   12 8.0 0.157 138.0, 243.0 -0.09
WSB/EiJ f 253.0 40.5   6 16.5 0.16 204.0, 310.0 1.2
ZALENDE/EiJ f 196.0 31.8   7 12.0 0.162 153.0, 243.0 0.25


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 84.6 14.1575 112.458 56.742
A/J f 53.65 13.431 80.0784 27.2216
AKR/J f 239.02 13.431 265.4484 212.5916
BALB/cByJ f 144.1308 11.7797 167.31 120.9515
BTBR T+ Itpr3tf/J f 224.5333 14.1575 252.3913 196.6753
C3H/HeJ f 128.6444 14.1575 156.5025 100.7864
C57BL/6J f 208.1 10.0109 227.7986 188.4014
C57BR/cdJ f 288.0 17.3393 322.119 253.881
C57L/J f 203.2143 16.0531 234.8023 171.6263
C58/J f 259.08 13.431 285.5084 232.6516
CBA/J f 110.15 11.3513 132.4861 87.8139
CZECHII/EiJ f 134.78 18.9943 172.1554 97.4046
DBA/2J f 79.4 12.2608 103.5257 55.2743
FVB/NJ f 199.49 13.431 225.9184 173.0616
I/LnJ f 216.0692 11.7797 239.2485 192.89
KK/HlJ f 144.5 14.1575 172.358 116.642
LG/J f 210.25 13.431 236.6784 183.8216
LP/J f 122.15 15.0163 151.6979 92.6021
MA/MyJ f 289.0429 16.0531 320.6309 257.4548
MOLF/EiJ f 170.8714 16.0531 202.4594 139.2834
MRL/MpJ f 198.04 13.431 224.4684 171.6116
NOD/ShiLtJ f 242.9636 12.8059 268.1622 217.7651
NON/ShiLtJ f 222.3583 12.2608 246.4841 198.2326
NOR/LtJ f 230.35 13.431 256.7784 203.9216
NZO/HlLtJ f 71.5571 16.0531 103.1452 39.9691
NZW/LacJ f 145.5 13.431 171.9284 119.0716
PERA/EiJ f 133.1875 15.0163 162.7354 103.6396
P/J f 200.0 15.0163 229.5479 170.4521
PL/J f 229.4667 14.1575 257.3247 201.6087
PWD/PhJ f 152.12 18.9943 189.4954 114.7446
RIIIS/J f 222.0857 16.0531 253.6737 190.4977
SEA/GnJ f 153.1571 16.0531 184.7452 121.5691
SJL/J f 157.69 13.431 184.1184 131.2616
SM/J f 221.2778 14.1575 249.1358 193.4198
SWR/J f 175.9583 12.2608 200.0841 151.8326
WSB/EiJ f 253.2167 17.3393 287.3356 219.0977
ZALENDE/EiJ f 195.6571 16.0531 227.2452 164.0691




  GENOME-WIDE ASSOCIATION (GWAS) VIEW
Plot generated with pyLMM using 132K SNP array. Click on plot to view at larger size.