Project measure / variable:   HMDPpheno10   GGI

ID, description, units MPD:50529   GGI   gamma-glutamylisoleucine (16h fast), relative abundance    
Data set, strains HMDPpheno10   HMDP   95 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno10 - gamma-glutamylisoleucine (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested95 strains
Mean of the strain means34142   None
Median of the strain means33588   None
SD of the strain means± 9922
Coefficient of variation (CV)0.291
Min–max range of strain means13211   –   61138   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 20 3992632592.8439 199631629.6422 0.9993 0.4898
Residuals 30 5993251686.6953 199775056.2232


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 37374.0 0.0   1   0.0 0.0 37374.0, 37374.0 0.33
A/J m 40710.0 14962.0   2   10580.0 0.368 30130.0, 51290.0 0.66
AKR/J m 48983.0 0.0   1   0.0 0.0 48983.0, 48983.0 1.5
AXB10/PgnJ m 24740.0 0.0   1   0.0 0.0 24740.0, 24740.0 -0.95
AXB12/PgnJ m 44129.0 0.0   1   0.0 0.0 44129.0, 44129.0 1.01
AXB13/PgnJ m 28716.0 0.0   1   0.0 0.0 28716.0, 28716.0 -0.55
AXB15/PgnJ m 22325.0 0.0   1   0.0 0.0 22325.0, 22325.0 -1.19
AXB19b/PgnJ m 43698.0 16419.0   2   11610.0 0.376 32088.0, 55308.0 0.96
AXB23/PgnJ m 28223.0 0.0   1   0.0 0.0 28223.0, 28223.0 -0.6
AXB24/PgnJ m 41871.0 32718.0   2   23135.0 0.781 18736.0, 65006.0 0.78
AXB2/PgnJ m 29209.0 0.0   1   0.0 0.0 29209.0, 29209.0 -0.5
AXB4/PgnJ m 38186.0 0.0   1   0.0 0.0 38186.0, 38186.0 0.41
AXB5/PgnJ m 31933.0 0.0   1   0.0 0.0 31933.0, 31933.0 -0.22
AXB6/PgnJ m 41000.0 0.0   1   0.0 0.0 41000.0, 41000.0 0.69
AXB8/PgnJ m 42118.0 0.0   1   0.0 0.0 42118.0, 42118.0 0.8
BALB/cJ m 39316.0 7643.0   3 4412.0 0.194 30954.0, 45939.0 0.52
BTBR T+ Itpr3tf/J m 36046.0 0.0   1   0.0 0.0 36046.0, 36046.0 0.19
BUB/BnJ m 38371.0 0.0   1   0.0 0.0 38371.0, 38371.0 0.43
BXA11/PgnJ m 42478.0 0.0   1   0.0 0.0 42478.0, 42478.0 0.84
BXA12/PgnJ m 35363.0 0.0   1   0.0 0.0 35363.0, 35363.0 0.12
BXA13/PgnJ m 46151.0 0.0   1   0.0 0.0 46151.0, 46151.0 1.21
BXA14/PgnJ m 41896.0 0.0   1   0.0 0.0 41896.0, 41896.0 0.78
BXA16/PgnJ m 26631.0 11716.0   2   8285.0 0.44 18346.0, 34916.0 -0.76
BXA1/PgnJ m 26930.0 0.0   1   0.0 0.0 26930.0, 26930.0 -0.73
BXA24/PgnJ m 40946.0 0.0   1   0.0 0.0 40946.0, 40946.0 0.69
BXA26/PgnJ m 23867.0 0.0   1   0.0 0.0 23867.0, 23867.0 -1.04
BXA2/PgnJ m 34042.0 0.0   1   0.0 0.0 34042.0, 34042.0 -0.01
BXA4/PgnJ m 48986.0 0.0   1   0.0 0.0 48986.0, 48986.0 1.5
BXA7/PgnJ m 24114.0 0.0   1   0.0 0.0 24114.0, 24114.0 -1.01
BXA8/PgnJ m 43384.0 0.0   1   0.0 0.0 43384.0, 43384.0 0.93
BXD11/TyJ m 35032.0 0.0   1   0.0 0.0 35032.0, 35032.0 0.09
BXD12/TyJ m 33051.0 0.0   1   0.0 0.0 33051.0, 33051.0 -0.11
BXD13/TyJ m 23788.0 0.0   1   0.0 0.0 23788.0, 23788.0 -1.04
BXD14/TyJ m 30069.0 0.0   1   0.0 0.0 30069.0, 30069.0 -0.41
BXD18/TyJ m 22004.0 0.0   1   0.0 0.0 22004.0, 22004.0 -1.22
BXD19/TyJ m 29558.0 0.0   1   0.0 0.0 29558.0, 29558.0 -0.46
BXD1/TyJ m 22167.0 0.0   1   0.0 0.0 22167.0, 22167.0 -1.21
BXD20/TyJ m 31934.0 0.0   1   0.0 0.0 31934.0, 31934.0 -0.22
BXD22/TyJ m 26294.0 0.0   1   0.0 0.0 26294.0, 26294.0 -0.79
BXD24/TyJ m 26993.0 0.0   1   0.0 0.0 26993.0, 26993.0 -0.72
BXD24/TyJ-Cep290rd16/J m 21922.0 0.0   1   0.0 0.0 21922.0, 21922.0 -1.23
BXD28/TyJ m 30570.0 3956.0   2   2798.0 0.129 27772.0, 33367.0 -0.36
BXD29-Tlr4lps-2J/J m 27282.0 0.0   1   0.0 0.0 27282.0, 27282.0 -0.69
BXD2/TyJ m 24797.0 0.0   1   0.0 0.0 24797.0, 24797.0 -0.94
BXD32/TyJ m 34969.0 0.0   1   0.0 0.0 34969.0, 34969.0 0.08
BXD33/TyJ m 34804.0 0.0   1   0.0 0.0 34804.0, 34804.0 0.07
BXD36/TyJ m 29824.0 0.0   1   0.0 0.0 29824.0, 29824.0 -0.44
BXD38/TyJ m 13211.0 0.0   1   0.0 0.0 13211.0, 13211.0 -2.11
BXD39/TyJ m 16838.0 0.0   1   0.0 0.0 16838.0, 16838.0 -1.74
BXD42/TyJ m 20138.0 0.0   1   0.0 0.0 20138.0, 20138.0 -1.41
BXD5/TyJ m 33588.0 0.0   1   0.0 0.0 33588.0, 33588.0 -0.06
BXD6/TyJ m 27318.0 0.0   1   0.0 0.0 27318.0, 27318.0 -0.69
BXD9/TyJ m 22111.0 0.0   1   0.0 0.0 22111.0, 22111.0 -1.21
BXH10/TyJ m 25358.0 0.0   1   0.0 0.0 25358.0, 25358.0 -0.89
BXH19/TyJ m 54515.0 0.0   1   0.0 0.0 54515.0, 54515.0 2.05
BXH20/KccJ m 21189.0 0.0   1   0.0 0.0 21189.0, 21189.0 -1.31
BXH22/KccJ m 42548.0 0.0   1   0.0 0.0 42548.0, 42548.0 0.85
BXH2/TyJ m 38043.0 0.0   1   0.0 0.0 38043.0, 38043.0 0.39
BXH4/TyJ m 40036.0 8034.0   2   5681.0 0.201 34354.0, 45717.0 0.59
BXH6/TyJ m 20236.0 0.0   1   0.0 0.0 20236.0, 20236.0 -1.4
BXH7/TyJ m 30453.0 0.0   1   0.0 0.0 30453.0, 30453.0 -0.37
BXH8/TyJ m 34042.0 0.0   1   0.0 0.0 34042.0, 34042.0 -0.01
BXH9/TyJ m 31940.0 0.0   1   0.0 0.0 31940.0, 31940.0 -0.22
C3H/HeJ m 44587.0 11551.0   2   8168.0 0.259 36420.0, 52755.0 1.05
C57BL/6J m 28176.0 5834.0   5 2609.0 0.207 23162.0, 37279.0 -0.6
C57L/J m 19558.0 0.0   1   0.0 0.0 19558.0, 19558.0 -1.47
C58/J m 30219.0 0.0   1   0.0 0.0 30219.0, 30219.0 -0.4
CAST/EiJ m 32720.0 0.0   1   0.0 0.0 32720.0, 32720.0 -0.14
CBA/J m 61138.0 0.0   1   0.0 0.0 61138.0, 61138.0 2.72
CE/J m 52594.0 0.0   1   0.0 0.0 52594.0, 52594.0 1.86
CXB11/HiAJ m 45190.0 2916.0   2   2062.0 0.0645 43128.0, 47252.0 1.11
CXB12/HiAJ m 38416.0 2708.0   2   1915.0 0.0705 36501.0, 40332.0 0.43
CXB13/HiAJ m 35489.0 10132.0   3 5850.0 0.286 24074.0, 43420.0 0.14
CXB1/ByJ m 25915.0 5584.0   2   3948.0 0.215 21966.0, 29863.0 -0.83
CXB2/ByJ m 57555.0 13965.0   3 8063.0 0.243 47420.0, 73485.0 2.36
CXB3/ByJ m 30642.0 7452.0   2   5270.0 0.243 25372.0, 35912.0 -0.35
CXB4/ByJ m 32928.0 6847.0   2   4841.0 0.208 28087.0, 37769.0 -0.12
CXB6/ByJ m 26494.0 12768.0   2   9028.0 0.482 17465.0, 35522.0 -0.77
CXB7/ByJ m 45697.0 12177.0   2   8610.0 0.266 37086.0, 54307.0 1.16
CXB8/HiAJ m 47898.0 3216.0   3 1857.0 0.0671 44218.0, 50171.0 1.39
CXB9/HiAJ m 49827.0 33490.0   3 19335.0 0.672 27652.0, 88351.0 1.58
DBA/2J m 31749.0 15899.0   3 9179.0 0.501 20186.0, 49880.0 -0.24
I/LnJ m 57961.0 0.0   1   0.0 0.0 57961.0, 57961.0 2.4
KK/HlJ m 18320.0 0.0   1   0.0 0.0 18320.0, 18320.0 -1.59
LG/J m 35073.0 0.0   1   0.0 0.0 35073.0, 35073.0 0.09
LP/J m 34042.0 0.0   1   0.0 0.0 34042.0, 34042.0 -0.01
MA/MyJ m 21785.0 0.0   1   0.0 0.0 21785.0, 21785.0 -1.25
NOD/ShiLtJ m 36874.0 0.0   1   0.0 0.0 36874.0, 36874.0 0.28
NON/ShiLtJ m 31279.0 0.0   1   0.0 0.0 31279.0, 31279.0 -0.29
NZW/LacJ m 38913.0 0.0   1   0.0 0.0 38913.0, 38913.0 0.48
PL/J m 47012.0 0.0   1   0.0 0.0 47012.0, 47012.0 1.3
RIIIS/J m 36665.0 0.0   1   0.0 0.0 36665.0, 36665.0 0.25
SEA/GnJ m 21562.0 0.0   1   0.0 0.0 21562.0, 21562.0 -1.27
SJL/J m 44760.0 0.0   1   0.0 0.0 44760.0, 44760.0 1.07
SWR/J m 34133.0 0.0   1   0.0 0.0 34133.0, 34133.0 0.0


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 40709.55 9994.3748 61120.7864 20298.3136
AXB19b/PgnJ m 43698.1 9994.3748 64109.3364 23286.8636
AXB24/PgnJ m 41870.9 9994.3748 62282.1364 21459.6636
BALB/cJ m 39315.9 8160.3729 55981.6047 22650.1953
BXA16/PgnJ m 26630.9 9994.3748 47042.1364 6219.6636
BXD28/TyJ m 30569.7 9994.3748 50980.9364 10158.4636
BXH4/TyJ m 40035.5 9994.3748 60446.7364 19624.2636
C3H/HeJ m 44587.05 9994.3748 64998.2864 24175.8136
C57BL/6J m 28176.14 6320.9976 41085.3394 15266.9406
CXB11/HiAJ m 45189.7 9994.3748 65600.9364 24778.4636
CXB12/HiAJ m 38416.45 9994.3748 58827.6864 18005.2136
CXB13/HiAJ m 35488.9333 8160.3729 52154.6381 18823.2286
CXB1/ByJ m 25914.55 9994.3748 46325.7864 5503.3136
CXB2/ByJ m 57555.4667 8160.3729 74221.1714 40889.7619
CXB3/ByJ m 30641.85 9994.3748 51053.0864 10230.6136
CXB4/ByJ m 32927.95 9994.3748 53339.1864 12516.7136
CXB6/ByJ m 26493.6 9994.3748 46904.8364 6082.3636
CXB7/ByJ m 45696.8 9994.3748 66108.0364 25285.5636
CXB8/HiAJ m 47897.9667 8160.3729 64563.6714 31232.2619
CXB9/HiAJ m 49827.3667 8160.3729 66493.0714 33161.6619
DBA/2J m 31749.1333 8160.3729 48414.8381 15083.4286




  GWAS USING LINEAR MIXED MODELS