Project measure / variable:   HMDPpheno10   GGG

ID, description, units MPD:50528   GGG   gamma-glutamylglutamate (16h fast), relative abundance    
Data set, strains HMDPpheno10   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno10 - gamma-glutamylglutamate (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means462468   None
Median of the strain means460526   None
SD of the strain means± 98106
Coefficient of variation (CV)0.212
Min–max range of strain means168333   –   702456   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 320001038753.679 15238144702.5561 1.1173 0.3774
Residuals 34 463693193957.449 13638035116.3956


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 525435.0 0.0   1   0.0 0.0 525435.0, 525435.0 0.64
A/J m 484537.0 20850.0   2   14743.0 0.043 469794.0, 499281.0 0.22
AKR/J m 470817.0 0.0   1   0.0 0.0 470817.0, 470817.0 0.09
AXB10/PgnJ m 637026.0 0.0   1   0.0 0.0 637026.0, 637026.0 1.78
AXB12/PgnJ m 556611.0 0.0   1   0.0 0.0 556611.0, 556611.0 0.96
AXB13/PgnJ m 520497.0 0.0   1   0.0 0.0 520497.0, 520497.0 0.59
AXB15/PgnJ m 435327.0 0.0   1   0.0 0.0 435327.0, 435327.0 -0.28
AXB19a/PgnJ m 473657.0 0.0   1   0.0 0.0 473657.0, 473657.0 0.11
AXB19b/PgnJ m 420070.0 19510.0   2   13796.0 0.0464 406274.0, 433866.0 -0.43
AXB19/PgnJ m 447480.0 0.0   1   0.0 0.0 447480.0, 447480.0 -0.15
AXB1/PgnJ m 412009.0 0.0   1   0.0 0.0 412009.0, 412009.0 -0.51
AXB23/PgnJ m 470194.0 0.0   1   0.0 0.0 470194.0, 470194.0 0.08
AXB24/PgnJ m 402817.0 81231.0   2   57439.0 0.202 345378.0, 460256.0 -0.61
AXB2/PgnJ m 393213.0 0.0   1   0.0 0.0 393213.0, 393213.0 -0.71
AXB4/PgnJ m 445839.0 0.0   1   0.0 0.0 445839.0, 445839.0 -0.17
AXB5/PgnJ m 491705.0 0.0   1   0.0 0.0 491705.0, 491705.0 0.3
AXB6/PgnJ m 590436.0 0.0   1   0.0 0.0 590436.0, 590436.0 1.3
AXB8/PgnJ m 495016.0 0.0   1   0.0 0.0 495016.0, 495016.0 0.33
BALB/cJ m 549915.0 33858.0   3 19548.0 0.0616 524160.0, 588266.0 0.89
BTBR T+ Itpr3tf/J m 381730.0 0.0   1   0.0 0.0 381730.0, 381730.0 -0.82
BUB/BnJ m 612895.0 0.0   1   0.0 0.0 612895.0, 612895.0 1.53
BXA11/PgnJ m 554672.0 0.0   1   0.0 0.0 554672.0, 554672.0 0.94
BXA12/PgnJ m 408998.0 0.0   1   0.0 0.0 408998.0, 408998.0 -0.55
BXA13/PgnJ m 523960.0 0.0   1   0.0 0.0 523960.0, 523960.0 0.63
BXA14/PgnJ m 356778.0 0.0   1   0.0 0.0 356778.0, 356778.0 -1.08
BXA16/PgnJ m 409457.0 100258.0   2   70893.0 0.245 338564.0, 480350.0 -0.54
BXA1/PgnJ m 517739.0 0.0   1   0.0 0.0 517739.0, 517739.0 0.56
BXA24/PgnJ m 486667.0 0.0   1   0.0 0.0 486667.0, 486667.0 0.25
BXA25/PgnJ m 336040.0 0.0   1   0.0 0.0 336040.0, 336040.0 -1.29
BXA26/PgnJ m 284992.0 0.0   1   0.0 0.0 284992.0, 284992.0 -1.81
BXA2/PgnJ m 416932.0 0.0   1   0.0 0.0 416932.0, 416932.0 -0.46
BXA4/PgnJ m 444471.0 0.0   1   0.0 0.0 444471.0, 444471.0 -0.18
BXA7/PgnJ m 447858.0 0.0   1   0.0 0.0 447858.0, 447858.0 -0.15
BXA8/PgnJ m 490764.0 0.0   1   0.0 0.0 490764.0, 490764.0 0.29
BXD11/TyJ m 489223.0 0.0   1   0.0 0.0 489223.0, 489223.0 0.27
BXD12/TyJ m 366399.0 0.0   1   0.0 0.0 366399.0, 366399.0 -0.98
BXD13/TyJ m 586531.0 0.0   1   0.0 0.0 586531.0, 586531.0 1.26
BXD14/TyJ m 347772.0 0.0   1   0.0 0.0 347772.0, 347772.0 -1.17
BXD15/TyJ m 323044.0 0.0   1   0.0 0.0 323044.0, 323044.0 -1.42
BXD18/TyJ m 438955.0 0.0   1   0.0 0.0 438955.0, 438955.0 -0.24
BXD19/TyJ m 488352.0 11826.0   2   8363.0 0.0242 479989.0, 496714.0 0.26
BXD1/TyJ m 387870.0 0.0   1   0.0 0.0 387870.0, 387870.0 -0.76
BXD20/TyJ m 404024.0 0.0   1   0.0 0.0 404024.0, 404024.0 -0.6
BXD21/TyJ m 369873.0 0.0   1   0.0 0.0 369873.0, 369873.0 -0.94
BXD22/TyJ m 544491.0 0.0   1   0.0 0.0 544491.0, 544491.0 0.84
BXD24/TyJ m 428608.0 0.0   1   0.0 0.0 428608.0, 428608.0 -0.35
BXD24/TyJ-Cep290rd16/J m 392740.0 0.0   1   0.0 0.0 392740.0, 392740.0 -0.71
BXD28/TyJ m 463176.0 40638.0   2   28735.0 0.0877 434441.0, 491912.0 0.01
BXD29-Tlr4lps-2J/J m 332372.0 0.0   1   0.0 0.0 332372.0, 332372.0 -1.33
BXD2/TyJ m 347904.0 0.0   1   0.0 0.0 347904.0, 347904.0 -1.17
BXD32/TyJ m 397639.0 0.0   1   0.0 0.0 397639.0, 397639.0 -0.66
BXD33/TyJ m 315866.0 0.0   1   0.0 0.0 315866.0, 315866.0 -1.49
BXD34/TyJ m 552360.0 0.0   1   0.0 0.0 552360.0, 552360.0 0.92
BXD36/TyJ m 230744.0 0.0   1   0.0 0.0 230744.0, 230744.0 -2.36
BXD38/TyJ m 371824.0 0.0   1   0.0 0.0 371824.0, 371824.0 -0.92
BXD39/TyJ m 306478.0 0.0   1   0.0 0.0 306478.0, 306478.0 -1.59
BXD40/TyJ m 431100.0 0.0   1   0.0 0.0 431100.0, 431100.0 -0.32
BXD42/TyJ m 408750.0 0.0   1   0.0 0.0 408750.0, 408750.0 -0.55
BXD5/TyJ m 355464.0 0.0   1   0.0 0.0 355464.0, 355464.0 -1.09
BXD6/TyJ m 555201.0 0.0   1   0.0 0.0 555201.0, 555201.0 0.95
BXD8/TyJ m 406269.0 0.0   1   0.0 0.0 406269.0, 406269.0 -0.57
BXD9/TyJ m 397165.0 0.0   1   0.0 0.0 397165.0, 397165.0 -0.67
BXH10/TyJ m 409831.0 0.0   1   0.0 0.0 409831.0, 409831.0 -0.54
BXH19/TyJ m 247053.0 0.0   1   0.0 0.0 247053.0, 247053.0 -2.2
BXH20/KccJ m 487948.0 0.0   1   0.0 0.0 487948.0, 487948.0 0.26
BXH22/KccJ m 476483.0 0.0   1   0.0 0.0 476483.0, 476483.0 0.14
BXH2/TyJ m 428855.0 0.0   1   0.0 0.0 428855.0, 428855.0 -0.34
BXH4/TyJ m 353835.0 1902.0   2   1345.0 0.00538 352490.0, 355181.0 -1.11
BXH6/TyJ m 533616.0 0.0   1   0.0 0.0 533616.0, 533616.0 0.73
BXH7/TyJ m 309289.0 0.0   1   0.0 0.0 309289.0, 309289.0 -1.56
BXH8/TyJ m 430420.0 0.0   1   0.0 0.0 430420.0, 430420.0 -0.33
BXH9/TyJ m 435522.0 0.0   1   0.0 0.0 435522.0, 435522.0 -0.27
C3H/HeJ m 534264.0 38765.0   2   27411.0 0.0726 506853.0, 561675.0 0.73
C57BL/6J m 402588.0 119834.0   5 53591.0 0.298 306258.0, 609591.0 -0.61
C57L/J m 591779.0 0.0   1   0.0 0.0 591779.0, 591779.0 1.32
C58/J m 601088.0 0.0   1   0.0 0.0 601088.0, 601088.0 1.41
CAST/EiJ m 168333.0 0.0   1   0.0 0.0 168333.0, 168333.0 -3.0
CBA/J m 582321.0 0.0   1   0.0 0.0 582321.0, 582321.0 1.22
CE/J m 486299.0 0.0   1   0.0 0.0 486299.0, 486299.0 0.24
CXB11/HiAJ m 452464.0 82353.0   2   58232.0 0.182 394231.0, 510696.0 -0.1
CXB12/HiAJ m 497930.0 130744.0   2   92450.0 0.263 405481.0, 590380.0 0.36
CXB13/HiAJ m 495126.0 109498.0   3 63219.0 0.221 404744.0, 616888.0 0.33
CXB1/ByJ m 373854.0 9768.0   3 5640.0 0.0261 362795.0, 381306.0 -0.9
CXB2/ByJ m 702456.0 371948.0   3 214745.0 0.529 450970.0, 1129714.0 2.45
CXB3/ByJ m 486810.0 33151.0   2   23441.0 0.0681 463368.0, 510251.0 0.25
CXB4/ByJ m 406517.0 28075.0   2   19852.0 0.0691 386665.0, 426369.0 -0.57
CXB6/ByJ m 481884.0 61970.0   3 35779.0 0.129 412375.0, 531358.0 0.2
CXB7/ByJ m 533581.0 288.0   2   204.0 0.00054 533377.0, 533785.0 0.72
CXB8/HiAJ m 446052.0 76157.0   3 43969.0 0.171 392478.0, 533231.0 -0.17
CXB9/HiAJ m 457877.0 128274.0   3 74059.0 0.28 355892.0, 601894.0 -0.05
DBA/2J m 425357.0 38223.0   4 19111.0 0.0899 375177.0, 465047.0 -0.38
FVB/NJ m 590396.0 0.0   1   0.0 0.0 590396.0, 590396.0 1.3
I/LnJ m 659664.0 0.0   1   0.0 0.0 659664.0, 659664.0 2.01
KK/HlJ m 592745.0 0.0   1   0.0 0.0 592745.0, 592745.0 1.33
LG/J m 585785.0 0.0   1   0.0 0.0 585785.0, 585785.0 1.26
LP/J m 465387.0 0.0   1   0.0 0.0 465387.0, 465387.0 0.03
MA/MyJ m 687435.0 0.0   1   0.0 0.0 687435.0, 687435.0 2.29
NOD/ShiLtJ m 561821.0 0.0   1   0.0 0.0 561821.0, 561821.0 1.01
NON/ShiLtJ m 396162.0 0.0   1   0.0 0.0 396162.0, 396162.0 -0.68
NZW/LacJ m 548465.0 0.0   1   0.0 0.0 548465.0, 548465.0 0.88
PL/J m 592612.0 0.0   1   0.0 0.0 592612.0, 592612.0 1.33
RIIIS/J m 545496.0 0.0   1   0.0 0.0 545496.0, 545496.0 0.85
SEA/GnJ m 558282.0 0.0   1   0.0 0.0 558282.0, 558282.0 0.98
SJL/J m 575191.0 0.0   1   0.0 0.0 575191.0, 575191.0 1.15
SM/J m 583145.0 0.0   1   0.0 0.0 583145.0, 583145.0 1.23
SWR/J m 502791.0 0.0   1   0.0 0.0 502791.0, 502791.0 0.41


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 484537.45 82577.3429 652354.8017 316720.0983
AXB19b/PgnJ m 420069.7 82577.3429 587887.0517 252252.3483
AXB24/PgnJ m 402816.8 82577.3429 570634.1517 234999.4483
BALB/cJ m 549914.9 67424.1181 686937.1939 412892.6061
BXA16/PgnJ m 409457.3 82577.3429 577274.6517 241639.9483
BXD19/TyJ m 488351.65 82577.3429 656169.0017 320534.2983
BXD28/TyJ m 463176.35 82577.3429 630993.7017 295358.9983
BXH4/TyJ m 353835.4 82577.3429 521652.7517 186018.0483
C3H/HeJ m 534264.15 82577.3429 702081.5017 366446.7983
C57BL/6J m 402588.22 52226.4973 508725.2324 296451.2076
CXB11/HiAJ m 452463.75 82577.3429 620281.1017 284646.3983
CXB12/HiAJ m 497930.45 82577.3429 665747.8017 330113.0983
CXB13/HiAJ m 495125.7 67424.1181 632147.9939 358103.4061
CXB1/ByJ m 373853.8 67424.1181 510876.0939 236831.5061
CXB2/ByJ m 702455.6 67424.1181 839477.8939 565433.3061
CXB3/ByJ m 486809.55 82577.3429 654626.9017 318992.1983
CXB4/ByJ m 406517.05 82577.3429 574334.4017 238699.6983
CXB6/ByJ m 481884.3333 67424.1181 618906.6272 344862.0395
CXB7/ByJ m 533581.05 82577.3429 701398.4017 365763.6983
CXB8/HiAJ m 446051.8 67424.1181 583074.0939 309029.5061
CXB9/HiAJ m 457876.9 67424.1181 594899.1939 320854.6061
DBA/2J m 425357.45 58390.9991 544022.2374 306692.6626




  GWAS USING LINEAR MIXED MODELS