Project measure / variable:   HMDPpheno10   glycylproline

ID, description, units MPD:50526   glycylproline   glycylproline (16h fast), relative abundance    
Data set, strains HMDPpheno10   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno10 - glycylproline (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means300021   None
Median of the strain means285141   None
SD of the strain means± 119905
Coefficient of variation (CV)0.400
Min–max range of strain means105645   –   1001954   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 353678625125.281 16841839291.6801 6.0278 < 0.0001
Residuals 34 94997282972.3074 2794037734.4796


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 322916.0 0.0   1   0.0 0.0 322916.0, 322916.0 0.19
A/J m 154767.0 21074.0   2   14902.0 0.136 139865.0, 169669.0 -1.21
AKR/J m 129262.0 0.0   1   0.0 0.0 129262.0, 129262.0 -1.42
AXB10/PgnJ m 332546.0 0.0   1   0.0 0.0 332546.0, 332546.0 0.27
AXB12/PgnJ m 170276.0 0.0   1   0.0 0.0 170276.0, 170276.0 -1.08
AXB13/PgnJ m 276428.0 0.0   1   0.0 0.0 276428.0, 276428.0 -0.2
AXB15/PgnJ m 201207.0 0.0   1   0.0 0.0 201207.0, 201207.0 -0.82
AXB19a/PgnJ m 330063.0 0.0   1   0.0 0.0 330063.0, 330063.0 0.25
AXB19b/PgnJ m 478341.0 126059.0   2   89137.0 0.264 389204.0, 567478.0 1.49
AXB19/PgnJ m 396867.0 0.0   1   0.0 0.0 396867.0, 396867.0 0.81
AXB1/PgnJ m 387780.0 0.0   1   0.0 0.0 387780.0, 387780.0 0.73
AXB23/PgnJ m 148764.0 0.0   1   0.0 0.0 148764.0, 148764.0 -1.26
AXB24/PgnJ m 192612.0 24440.0   2   17282.0 0.127 175330.0, 209893.0 -0.9
AXB2/PgnJ m 113980.0 0.0   1   0.0 0.0 113980.0, 113980.0 -1.55
AXB4/PgnJ m 486866.0 0.0   1   0.0 0.0 486866.0, 486866.0 1.56
AXB5/PgnJ m 261335.0 0.0   1   0.0 0.0 261335.0, 261335.0 -0.32
AXB6/PgnJ m 386277.0 0.0   1   0.0 0.0 386277.0, 386277.0 0.72
AXB8/PgnJ m 213798.0 0.0   1   0.0 0.0 213798.0, 213798.0 -0.72
BALB/cJ m 173885.0 17022.0   3 9828.0 0.0979 156297.0, 190279.0 -1.05
BTBR T+ Itpr3tf/J m 336859.0 0.0   1   0.0 0.0 336859.0, 336859.0 0.31
BUB/BnJ m 266980.0 0.0   1   0.0 0.0 266980.0, 266980.0 -0.28
BXA11/PgnJ m 157887.0 0.0   1   0.0 0.0 157887.0, 157887.0 -1.19
BXA12/PgnJ m 161275.0 0.0   1   0.0 0.0 161275.0, 161275.0 -1.16
BXA13/PgnJ m 312030.0 0.0   1   0.0 0.0 312030.0, 312030.0 0.1
BXA14/PgnJ m 573748.0 0.0   1   0.0 0.0 573748.0, 573748.0 2.28
BXA16/PgnJ m 298561.0 46274.0   2   32721.0 0.155 265840.0, 331282.0 -0.01
BXA1/PgnJ m 243374.0 0.0   1   0.0 0.0 243374.0, 243374.0 -0.47
BXA24/PgnJ m 416224.0 0.0   1   0.0 0.0 416224.0, 416224.0 0.97
BXA25/PgnJ m 161868.0 0.0   1   0.0 0.0 161868.0, 161868.0 -1.15
BXA26/PgnJ m 289591.0 0.0   1   0.0 0.0 289591.0, 289591.0 -0.09
BXA2/PgnJ m 299711.0 0.0   1   0.0 0.0 299711.0, 299711.0 0.0
BXA4/PgnJ m 223685.0 0.0   1   0.0 0.0 223685.0, 223685.0 -0.64
BXA7/PgnJ m 341117.0 0.0   1   0.0 0.0 341117.0, 341117.0 0.34
BXA8/PgnJ m 233682.0 0.0   1   0.0 0.0 233682.0, 233682.0 -0.55
BXD11/TyJ m 184948.0 0.0   1   0.0 0.0 184948.0, 184948.0 -0.96
BXD12/TyJ m 476869.0 0.0   1   0.0 0.0 476869.0, 476869.0 1.47
BXD13/TyJ m 207034.0 0.0   1   0.0 0.0 207034.0, 207034.0 -0.78
BXD14/TyJ m 293222.0 0.0   1   0.0 0.0 293222.0, 293222.0 -0.06
BXD15/TyJ m 448161.0 0.0   1   0.0 0.0 448161.0, 448161.0 1.24
BXD18/TyJ m 269431.0 0.0   1   0.0 0.0 269431.0, 269431.0 -0.26
BXD19/TyJ m 333493.0 40975.0   2   28974.0 0.123 304519.0, 362467.0 0.28
BXD1/TyJ m 389362.0 0.0   1   0.0 0.0 389362.0, 389362.0 0.75
BXD20/TyJ m 492783.0 0.0   1   0.0 0.0 492783.0, 492783.0 1.61
BXD21/TyJ m 238174.0 0.0   1   0.0 0.0 238174.0, 238174.0 -0.52
BXD22/TyJ m 376192.0 0.0   1   0.0 0.0 376192.0, 376192.0 0.64
BXD24/TyJ m 243965.0 0.0   1   0.0 0.0 243965.0, 243965.0 -0.47
BXD24/TyJ-Cep290rd16/J m 280515.0 0.0   1   0.0 0.0 280515.0, 280515.0 -0.16
BXD28/TyJ m 187535.0 10814.0   2   7647.0 0.0577 179888.0, 195181.0 -0.94
BXD29-Tlr4lps-2J/J m 388610.0 0.0   1   0.0 0.0 388610.0, 388610.0 0.74
BXD2/TyJ m 300103.0 0.0   1   0.0 0.0 300103.0, 300103.0 0.0
BXD32/TyJ m 268237.0 0.0   1   0.0 0.0 268237.0, 268237.0 -0.27
BXD33/TyJ m 324924.0 0.0   1   0.0 0.0 324924.0, 324924.0 0.21
BXD34/TyJ m 255336.0 0.0   1   0.0 0.0 255336.0, 255336.0 -0.37
BXD36/TyJ m 274123.0 0.0   1   0.0 0.0 274123.0, 274123.0 -0.22
BXD38/TyJ m 238675.0 0.0   1   0.0 0.0 238675.0, 238675.0 -0.51
BXD39/TyJ m 312736.0 0.0   1   0.0 0.0 312736.0, 312736.0 0.11
BXD40/TyJ m 369593.0 0.0   1   0.0 0.0 369593.0, 369593.0 0.58
BXD42/TyJ m 314896.0 0.0   1   0.0 0.0 314896.0, 314896.0 0.12
BXD5/TyJ m 295449.0 0.0   1   0.0 0.0 295449.0, 295449.0 -0.04
BXD6/TyJ m 282748.0 0.0   1   0.0 0.0 282748.0, 282748.0 -0.14
BXD8/TyJ m 256212.0 0.0   1   0.0 0.0 256212.0, 256212.0 -0.37
BXD9/TyJ m 405123.0 0.0   1   0.0 0.0 405123.0, 405123.0 0.88
BXH10/TyJ m 360812.0 0.0   1   0.0 0.0 360812.0, 360812.0 0.51
BXH19/TyJ m 426211.0 0.0   1   0.0 0.0 426211.0, 426211.0 1.05
BXH20/KccJ m 446094.0 0.0   1   0.0 0.0 446094.0, 446094.0 1.22
BXH22/KccJ m 334624.0 0.0   1   0.0 0.0 334624.0, 334624.0 0.29
BXH2/TyJ m 474698.0 0.0   1   0.0 0.0 474698.0, 474698.0 1.46
BXH4/TyJ m 321902.0 54221.0   2   38340.0 0.168 283562.0, 360242.0 0.18
BXH6/TyJ m 354547.0 0.0   1   0.0 0.0 354547.0, 354547.0 0.45
BXH7/TyJ m 323568.0 0.0   1   0.0 0.0 323568.0, 323568.0 0.2
BXH8/TyJ m 272490.0 0.0   1   0.0 0.0 272490.0, 272490.0 -0.23
BXH9/TyJ m 212627.0 0.0   1   0.0 0.0 212627.0, 212627.0 -0.73
C3H/HeJ m 347553.0 40371.0   2   28547.0 0.116 319006.0, 376100.0 0.4
C57BL/6J m 241148.0 47042.0   5 21038.0 0.195 178101.0, 296786.0 -0.49
C57L/J m 134690.0 0.0   1   0.0 0.0 134690.0, 134690.0 -1.38
C58/J m 1001954.0 0.0   1   0.0 0.0 1001954.0, 1001954.0 5.85
CAST/EiJ m 471217.0 0.0   1   0.0 0.0 471217.0, 471217.0 1.43
CBA/J m 241446.0 0.0   1   0.0 0.0 241446.0, 241446.0 -0.49
CE/J m 265801.0 0.0   1   0.0 0.0 265801.0, 265801.0 -0.29
CXB11/HiAJ m 220003.0 94381.0   2   66737.0 0.429 153266.0, 286740.0 -0.67
CXB12/HiAJ m 287032.0 17408.0   2   12309.0 0.0606 274723.0, 299341.0 -0.11
CXB13/HiAJ m 349396.0 67577.0   3 39015.0 0.193 294114.0, 424729.0 0.41
CXB1/ByJ m 218986.0 56534.0   3 32640.0 0.258 163853.0, 276825.0 -0.68
CXB2/ByJ m 245760.0 43407.0   3 25061.0 0.177 196501.0, 278413.0 -0.45
CXB3/ByJ m 284087.0 28791.0   2   20358.0 0.101 263729.0, 304445.0 -0.13
CXB4/ByJ m 337588.0 117304.0   2   82947.0 0.347 254641.0, 420534.0 0.31
CXB6/ByJ m 193403.0 71298.0   3 41164.0 0.369 111715.0, 243121.0 -0.89
CXB7/ByJ m 278907.0 35557.0   2   25143.0 0.127 253765.0, 304050.0 -0.18
CXB8/HiAJ m 437171.0 32221.0   3 18603.0 0.0737 401720.0, 464675.0 1.14
CXB9/HiAJ m 213419.0 36815.0   3 21255.0 0.173 171780.0, 241657.0 -0.72
DBA/2J m 289760.0 16479.0   4 8239.0 0.0569 268498.0, 308647.0 -0.09
FVB/NJ m 250695.0 0.0   1   0.0 0.0 250695.0, 250695.0 -0.41
I/LnJ m 378835.0 0.0   1   0.0 0.0 378835.0, 378835.0 0.66
KK/HlJ m 105645.0 0.0   1   0.0 0.0 105645.0, 105645.0 -1.62
LG/J m 234063.0 0.0   1   0.0 0.0 234063.0, 234063.0 -0.55
LP/J m 429957.0 0.0   1   0.0 0.0 429957.0, 429957.0 1.08
MA/MyJ m 159487.0 0.0   1   0.0 0.0 159487.0, 159487.0 -1.17
NOD/ShiLtJ m 153204.0 0.0   1   0.0 0.0 153204.0, 153204.0 -1.22
NON/ShiLtJ m 286195.0 0.0   1   0.0 0.0 286195.0, 286195.0 -0.12
NZW/LacJ m 239852.0 0.0   1   0.0 0.0 239852.0, 239852.0 -0.5
PL/J m 352818.0 0.0   1   0.0 0.0 352818.0, 352818.0 0.44
RIIIS/J m 134115.0 0.0   1   0.0 0.0 134115.0, 134115.0 -1.38
SEA/GnJ m 261305.0 0.0   1   0.0 0.0 261305.0, 261305.0 -0.32
SJL/J m 181142.0 0.0   1   0.0 0.0 181142.0, 181142.0 -0.99
SM/J m 421205.0 0.0   1   0.0 0.0 421205.0, 421205.0 1.01
SWR/J m 443816.0 0.0   1   0.0 0.0 443816.0, 443816.0 1.2


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 154766.8 37376.7156 230725.425 78808.175
AXB19b/PgnJ m 478340.95 37376.7156 554299.575 402382.325
AXB24/PgnJ m 192611.65 37376.7156 268570.275 116653.025
BALB/cJ m 173885.0333 30517.9605 235904.9909 111865.0757
BXA16/PgnJ m 298560.55 37376.7156 374519.175 222601.925
BXD19/TyJ m 333493.35 37376.7156 409451.975 257534.725
BXD28/TyJ m 187534.75 37376.7156 263493.375 111576.125
BXH4/TyJ m 321902.15 37376.7156 397860.775 245943.525
C3H/HeJ m 347552.75 37376.7156 423511.375 271594.125
C57BL/6J m 241148.08 23639.1105 289188.5326 193107.6274
CXB11/HiAJ m 220002.8 37376.7156 295961.425 144044.175
CXB12/HiAJ m 287032.1 37376.7156 362990.725 211073.475
CXB13/HiAJ m 349395.9333 30517.9605 411415.8909 287375.9757
CXB1/ByJ m 218986.0 30517.9605 281005.9576 156966.0424
CXB2/ByJ m 245759.6 30517.9605 307779.5576 183739.6424
CXB3/ByJ m 284086.7 37376.7156 360045.325 208128.075
CXB4/ByJ m 337587.55 37376.7156 413546.175 261628.925
CXB6/ByJ m 193402.6333 30517.9605 255422.5909 131382.6757
CXB7/ByJ m 278907.25 37376.7156 354865.875 202948.625
CXB8/HiAJ m 437170.9333 30517.9605 499190.8909 375150.9757
CXB9/HiAJ m 213419.2 30517.9605 275439.1576 151399.2424
DBA/2J m 289759.725 26429.329 343470.5838 236048.8662




  GWAS USING LINEAR MIXED MODELS