Project measure / variable:   HMDPpheno10   glycylproline

ID, description, units MPD:50526   glycylproline   glycylproline (16h fast), relative abundance    
Data set, strains HMDPpheno10   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means300021   None
Median of the strain means285141   None
SD of the strain means± 119905
Coefficient of variation (CV)0.400
Min–max range of strain means105645   –   1001954   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 353678625125.281 16841839291.6801 6.0278 < 0.0001
Residuals 34 94997282972.3074 2794037734.4796


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 106 (106)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129X1/SvJ m 322916.0 0.0   1   0.0 0.0 322916.0, 322916.0 0.19
A/J m 154767.0 21074.0   2   14902.0 0.136 139865.0, 169669.0 -1.21
AKR/J m 129262.0 0.0   1   0.0 0.0 129262.0, 129262.0 -1.42
AXB10/PgnJ m 332546.0 0.0   1   0.0 0.0 332546.0, 332546.0 0.27
AXB12/PgnJ m 170276.0 0.0   1   0.0 0.0 170276.0, 170276.0 -1.08
AXB13/PgnJ m 276428.0 0.0   1   0.0 0.0 276428.0, 276428.0 -0.2
AXB15/PgnJ m 201207.0 0.0   1   0.0 0.0 201207.0, 201207.0 -0.82
AXB19a/PgnJ m 330063.0 0.0   1   0.0 0.0 330063.0, 330063.0 0.25
AXB19b/PgnJ m 478341.0 126059.0   2   89137.0 0.264 389204.0, 567478.0 1.49
AXB19/PgnJ m 396867.0 0.0   1   0.0 0.0 396867.0, 396867.0 0.81
AXB1/PgnJ m 387780.0 0.0   1   0.0 0.0 387780.0, 387780.0 0.73
AXB23/PgnJ m 148764.0 0.0   1   0.0 0.0 148764.0, 148764.0 -1.26
AXB24/PgnJ m 192612.0 24440.0   2   17282.0 0.127 175330.0, 209893.0 -0.9
AXB2/PgnJ m 113980.0 0.0   1   0.0 0.0 113980.0, 113980.0 -1.55
AXB4/PgnJ m 486866.0 0.0   1   0.0 0.0 486866.0, 486866.0 1.56
AXB5/PgnJ m 261335.0 0.0   1   0.0 0.0 261335.0, 261335.0 -0.32
AXB6/PgnJ m 386277.0 0.0   1   0.0 0.0 386277.0, 386277.0 0.72
AXB8/PgnJ m 213798.0 0.0   1   0.0 0.0 213798.0, 213798.0 -0.72
BALB/cJ m 173885.0 17022.0   3 9828.0 0.0979 156297.0, 190279.0 -1.05
BTBR T+ Itpr3tf/J m 336859.0 0.0   1   0.0 0.0 336859.0, 336859.0 0.31
BUB/BnJ m 266980.0 0.0   1   0.0 0.0 266980.0, 266980.0 -0.28
BXA11/PgnJ m 157887.0 0.0   1   0.0 0.0 157887.0, 157887.0 -1.19
BXA12/PgnJ m 161275.0 0.0   1   0.0 0.0 161275.0, 161275.0 -1.16
BXA13/PgnJ m 312030.0 0.0   1   0.0 0.0 312030.0, 312030.0 0.1
BXA14/PgnJ m 573748.0 0.0   1   0.0 0.0 573748.0, 573748.0 2.28
BXA16/PgnJ m 298561.0 46274.0   2   32721.0 0.155 265840.0, 331282.0 -0.01
BXA1/PgnJ m 243374.0 0.0   1   0.0 0.0 243374.0, 243374.0 -0.47
BXA24/PgnJ m 416224.0 0.0   1   0.0 0.0 416224.0, 416224.0 0.97
BXA25/PgnJ m 161868.0 0.0   1   0.0 0.0 161868.0, 161868.0 -1.15
BXA26/PgnJ m 289591.0 0.0   1   0.0 0.0 289591.0, 289591.0 -0.09
BXA2/PgnJ m 299711.0 0.0   1   0.0 0.0 299711.0, 299711.0 0.0
BXA4/PgnJ m 223685.0 0.0   1   0.0 0.0 223685.0, 223685.0 -0.64
BXA7/PgnJ m 341117.0 0.0   1   0.0 0.0 341117.0, 341117.0 0.34
BXA8/PgnJ m 233682.0 0.0   1   0.0 0.0 233682.0, 233682.0 -0.55
BXD11/TyJ m 184948.0 0.0   1   0.0 0.0 184948.0, 184948.0 -0.96
BXD12/TyJ m 476869.0 0.0   1   0.0 0.0 476869.0, 476869.0 1.47
BXD13/TyJ m 207034.0 0.0   1   0.0 0.0 207034.0, 207034.0 -0.78
BXD14/TyJ m 293222.0 0.0   1   0.0 0.0 293222.0, 293222.0 -0.06
BXD15/TyJ m 448161.0 0.0   1   0.0 0.0 448161.0, 448161.0 1.24
BXD18/TyJ m 269431.0 0.0   1   0.0 0.0 269431.0, 269431.0 -0.26
BXD19/TyJ m 333493.0 40975.0   2   28974.0 0.123 304519.0, 362467.0 0.28
BXD1/TyJ m 389362.0 0.0   1   0.0 0.0 389362.0, 389362.0 0.75
BXD20/TyJ m 492783.0 0.0   1   0.0 0.0 492783.0, 492783.0 1.61
BXD21/TyJ m 238174.0 0.0   1   0.0 0.0 238174.0, 238174.0 -0.52
BXD22/TyJ m 376192.0 0.0   1   0.0 0.0 376192.0, 376192.0 0.64
BXD24/TyJ m 243965.0 0.0   1   0.0 0.0 243965.0, 243965.0 -0.47
BXD24/TyJ-Cep290rd16/J m 280515.0 0.0   1   0.0 0.0 280515.0, 280515.0 -0.16
BXD28/TyJ m 187535.0 10814.0   2   7647.0 0.0577 179888.0, 195181.0 -0.94
BXD29-Tlr4lps-2J/J m 388610.0 0.0   1   0.0 0.0 388610.0, 388610.0 0.74
BXD2/TyJ m 300103.0 0.0   1   0.0 0.0 300103.0, 300103.0 0.0
BXD32/TyJ m 268237.0 0.0   1   0.0 0.0 268237.0, 268237.0 -0.27
BXD33/TyJ m 324924.0 0.0   1   0.0 0.0 324924.0, 324924.0 0.21
BXD34/TyJ m 255336.0 0.0   1   0.0 0.0 255336.0, 255336.0 -0.37
BXD36/TyJ m 274123.0 0.0   1   0.0 0.0 274123.0, 274123.0 -0.22
BXD38/TyJ m 238675.0 0.0   1   0.0 0.0 238675.0, 238675.0 -0.51
BXD39/TyJ m 312736.0 0.0   1   0.0 0.0 312736.0, 312736.0 0.11
BXD40/TyJ m 369593.0 0.0   1   0.0 0.0 369593.0, 369593.0 0.58
BXD42/TyJ m 314896.0 0.0   1   0.0 0.0 314896.0, 314896.0 0.12
BXD5/TyJ m 295449.0 0.0   1   0.0 0.0 295449.0, 295449.0 -0.04
BXD6/TyJ m 282748.0 0.0   1   0.0 0.0 282748.0, 282748.0 -0.14
BXD8/TyJ m 256212.0 0.0   1   0.0 0.0 256212.0, 256212.0 -0.37
BXD9/TyJ m 405123.0 0.0   1   0.0 0.0 405123.0, 405123.0 0.88
BXH10/TyJ m 360812.0 0.0   1   0.0 0.0 360812.0, 360812.0 0.51
BXH19/TyJ m 426211.0 0.0   1   0.0 0.0 426211.0, 426211.0 1.05
BXH20/KccJ m 446094.0 0.0   1   0.0 0.0 446094.0, 446094.0 1.22
BXH22/KccJ m 334624.0 0.0   1   0.0 0.0 334624.0, 334624.0 0.29
BXH2/TyJ m 474698.0 0.0   1   0.0 0.0 474698.0, 474698.0 1.46
BXH4/TyJ m 321902.0 54221.0   2   38340.0 0.168 283562.0, 360242.0 0.18
BXH6/TyJ m 354547.0 0.0   1   0.0 0.0 354547.0, 354547.0 0.45
BXH7/TyJ m 323568.0 0.0   1   0.0 0.0 323568.0, 323568.0 0.2
BXH8/TyJ m 272490.0 0.0   1   0.0 0.0 272490.0, 272490.0 -0.23
BXH9/TyJ m 212627.0 0.0   1   0.0 0.0 212627.0, 212627.0 -0.73
C3H/HeJ m 347553.0 40371.0   2   28547.0 0.116 319006.0, 376100.0 0.4
C57BL/6J m 241148.0 47042.0   5 21038.0 0.195 178101.0, 296786.0 -0.49
C57L/J m 134690.0 0.0   1   0.0 0.0 134690.0, 134690.0 -1.38
C58/J m 1001954.0 0.0   1   0.0 0.0 1001954.0, 1001954.0 5.85
CAST/EiJ m 471217.0 0.0   1   0.0 0.0 471217.0, 471217.0 1.43
CBA/J m 241446.0 0.0   1   0.0 0.0 241446.0, 241446.0 -0.49
CE/J m 265801.0 0.0   1   0.0 0.0 265801.0, 265801.0 -0.29
CXB11/HiAJ m 220003.0 94381.0   2   66737.0 0.429 153266.0, 286740.0 -0.67
CXB12/HiAJ m 287032.0 17408.0   2   12309.0 0.0606 274723.0, 299341.0 -0.11
CXB13/HiAJ m 349396.0 67577.0   3 39015.0 0.193 294114.0, 424729.0 0.41
CXB1/ByJ m 218986.0 56534.0   3 32640.0 0.258 163853.0, 276825.0 -0.68
CXB2/ByJ m 245760.0 43407.0   3 25061.0 0.177 196501.0, 278413.0 -0.45
CXB3/ByJ m 284087.0 28791.0   2   20358.0 0.101 263729.0, 304445.0 -0.13
CXB4/ByJ m 337588.0 117304.0   2   82947.0 0.347 254641.0, 420534.0 0.31
CXB6/ByJ m 193403.0 71298.0   3 41164.0 0.369 111715.0, 243121.0 -0.89
CXB7/ByJ m 278907.0 35557.0   2   25143.0 0.127 253765.0, 304050.0 -0.18
CXB8/HiAJ m 437171.0 32221.0   3 18603.0 0.0737 401720.0, 464675.0 1.14
CXB9/HiAJ m 213419.0 36815.0   3 21255.0 0.173 171780.0, 241657.0 -0.72
DBA/2J m 289760.0 16479.0   4 8239.0 0.0569 268498.0, 308647.0 -0.09
FVB/NJ m 250695.0 0.0   1   0.0 0.0 250695.0, 250695.0 -0.41
I/LnJ m 378835.0 0.0   1   0.0 0.0 378835.0, 378835.0 0.66
KK/HlJ m 105645.0 0.0   1   0.0 0.0 105645.0, 105645.0 -1.62
LG/J m 234063.0 0.0   1   0.0 0.0 234063.0, 234063.0 -0.55
LP/J m 429957.0 0.0   1   0.0 0.0 429957.0, 429957.0 1.08
MA/MyJ m 159487.0 0.0   1   0.0 0.0 159487.0, 159487.0 -1.17
NOD/ShiLtJ m 153204.0 0.0   1   0.0 0.0 153204.0, 153204.0 -1.22
NON/ShiLtJ m 286195.0 0.0   1   0.0 0.0 286195.0, 286195.0 -0.12
NZW/LacJ m 239852.0 0.0   1   0.0 0.0 239852.0, 239852.0 -0.5
PL/J m 352818.0 0.0   1   0.0 0.0 352818.0, 352818.0 0.44
RIIIS/J m 134115.0 0.0   1   0.0 0.0 134115.0, 134115.0 -1.38
SEA/GnJ m 261305.0 0.0   1   0.0 0.0 261305.0, 261305.0 -0.32
SJL/J m 181142.0 0.0   1   0.0 0.0 181142.0, 181142.0 -0.99
SM/J m 421205.0 0.0   1   0.0 0.0 421205.0, 421205.0 1.01
SWR/J m 443816.0 0.0   1   0.0 0.0 443816.0, 443816.0 1.2


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 154766.8 37376.7156 230725.425 78808.175
AXB19b/PgnJ m 478340.95 37376.7156 554299.575 402382.325
AXB24/PgnJ m 192611.65 37376.7156 268570.275 116653.025
BALB/cJ m 173885.0333 30517.9605 235904.9909 111865.0757
BXA16/PgnJ m 298560.55 37376.7156 374519.175 222601.925
BXD19/TyJ m 333493.35 37376.7156 409451.975 257534.725
BXD28/TyJ m 187534.75 37376.7156 263493.375 111576.125
BXH4/TyJ m 321902.15 37376.7156 397860.775 245943.525
C3H/HeJ m 347552.75 37376.7156 423511.375 271594.125
C57BL/6J m 241148.08 23639.1105 289188.5326 193107.6274
CXB11/HiAJ m 220002.8 37376.7156 295961.425 144044.175
CXB12/HiAJ m 287032.1 37376.7156 362990.725 211073.475
CXB13/HiAJ m 349395.9333 30517.9605 411415.8909 287375.9757
CXB1/ByJ m 218986.0 30517.9605 281005.9576 156966.0424
CXB2/ByJ m 245759.6 30517.9605 307779.5576 183739.6424
CXB3/ByJ m 284086.7 37376.7156 360045.325 208128.075
CXB4/ByJ m 337587.55 37376.7156 413546.175 261628.925
CXB6/ByJ m 193402.6333 30517.9605 255422.5909 131382.6757
CXB7/ByJ m 278907.25 37376.7156 354865.875 202948.625
CXB8/HiAJ m 437170.9333 30517.9605 499190.8909 375150.9757
CXB9/HiAJ m 213419.2 30517.9605 275439.1576 151399.2424
DBA/2J m 289759.725 26429.329 343470.5838 236048.8662




  GWAS USING LINEAR MIXED MODELS

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