Project measure / variable:   HMDPpheno10   glycylglycine

ID, description, units MPD:50523   glycylglycine   glycylglycine (16h fast), relative abundance    
Data set, strains HMDPpheno10   HMDP   102 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno10 - glycylglycine (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested102 strains
Mean of the strain means30988   None
Median of the strain means30036   None
SD of the strain means± 11166
Coefficient of variation (CV)0.360
Min–max range of strain means12575   –   63922   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 4968265196.7826 236584056.9896 1.9884 0.0374
Residuals 33 3926435471.9847 118982893.0904


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 26547.0 0.0   1   0.0 0.0 26547.0, 26547.0 -0.4
A/J m 24547.0 7929.0   2   5607.0 0.323 18940.0, 30153.0 -0.58
AKR/J m 18176.0 0.0   1   0.0 0.0 18176.0, 18176.0 -1.15
AXB10/PgnJ m 29262.0 0.0   1   0.0 0.0 29262.0, 29262.0 -0.15
AXB12/PgnJ m 18804.0 0.0   1   0.0 0.0 18804.0, 18804.0 -1.09
AXB13/PgnJ m 46160.0 0.0   1   0.0 0.0 46160.0, 46160.0 1.36
AXB15/PgnJ m 21559.0 0.0   1   0.0 0.0 21559.0, 21559.0 -0.84
AXB19a/PgnJ m 21012.0 0.0   1   0.0 0.0 21012.0, 21012.0 -0.89
AXB19b/PgnJ m 48753.0 3899.0   2   2757.0 0.08 45997.0, 51510.0 1.59
AXB19/PgnJ m 43964.0 0.0   1   0.0 0.0 43964.0, 43964.0 1.16
AXB1/PgnJ m 49064.0 0.0   1   0.0 0.0 49064.0, 49064.0 1.62
AXB23/PgnJ m 25525.0 0.0   1   0.0 0.0 25525.0, 25525.0 -0.49
AXB24/PgnJ m 21051.0 4125.0   2   2917.0 0.196 18134.0, 23968.0 -0.89
AXB2/PgnJ m 26059.0 0.0   1   0.0 0.0 26059.0, 26059.0 -0.44
AXB4/PgnJ m 63922.0 0.0   1   0.0 0.0 63922.0, 63922.0 2.95
AXB6/PgnJ m 54459.0 0.0   1   0.0 0.0 54459.0, 54459.0 2.1
AXB8/PgnJ m 30348.0 0.0   1   0.0 0.0 30348.0, 30348.0 -0.06
BALB/cJ m 33538.0 1505.0   3 869.0 0.0449 32000.0, 35009.0 0.23
BTBR T+ Itpr3tf/J m 19015.0 0.0   1   0.0 0.0 19015.0, 19015.0 -1.07
BUB/BnJ m 49741.0 0.0   1   0.0 0.0 49741.0, 49741.0 1.68
BXA11/PgnJ m 31091.0 0.0   1   0.0 0.0 31091.0, 31091.0 0.01
BXA12/PgnJ m 14912.0 0.0   1   0.0 0.0 14912.0, 14912.0 -1.44
BXA13/PgnJ m 28035.0 0.0   1   0.0 0.0 28035.0, 28035.0 -0.26
BXA14/PgnJ m 30629.0 0.0   1   0.0 0.0 30629.0, 30629.0 -0.03
BXA16/PgnJ m 27557.0 9026.0   2   6383.0 0.328 21174.0, 33939.0 -0.31
BXA1/PgnJ m 33105.0 0.0   1   0.0 0.0 33105.0, 33105.0 0.19
BXA24/PgnJ m 45942.0 0.0   1   0.0 0.0 45942.0, 45942.0 1.34
BXA25/PgnJ m 15849.0 0.0   1   0.0 0.0 15849.0, 15849.0 -1.36
BXA26/PgnJ m 30196.0 0.0   1   0.0 0.0 30196.0, 30196.0 -0.07
BXA2/PgnJ m 27928.0 0.0   1   0.0 0.0 27928.0, 27928.0 -0.27
BXA7/PgnJ m 44533.0 0.0   1   0.0 0.0 44533.0, 44533.0 1.21
BXA8/PgnJ m 23462.0 0.0   1   0.0 0.0 23462.0, 23462.0 -0.67
BXD11/TyJ m 29817.0 0.0   1   0.0 0.0 29817.0, 29817.0 -0.1
BXD12/TyJ m 18072.0 0.0   1   0.0 0.0 18072.0, 18072.0 -1.16
BXD13/TyJ m 32217.0 0.0   1   0.0 0.0 32217.0, 32217.0 0.11
BXD14/TyJ m 35725.0 0.0   1   0.0 0.0 35725.0, 35725.0 0.42
BXD15/TyJ m 38617.0 0.0   1   0.0 0.0 38617.0, 38617.0 0.68
BXD18/TyJ m 29933.0 0.0   1   0.0 0.0 29933.0, 29933.0 -0.09
BXD19/TyJ m 28666.0 5151.0   2   3642.0 0.18 25024.0, 32308.0 -0.21
BXD1/TyJ m 31093.0 0.0   1   0.0 0.0 31093.0, 31093.0 0.01
BXD20/TyJ m 31591.0 0.0   1   0.0 0.0 31591.0, 31591.0 0.05
BXD21/TyJ m 13290.0 0.0   1   0.0 0.0 13290.0, 13290.0 -1.58
BXD22/TyJ m 13291.0 0.0   1   0.0 0.0 13291.0, 13291.0 -1.58
BXD24/TyJ m 20849.0 0.0   1   0.0 0.0 20849.0, 20849.0 -0.91
BXD24/TyJ-Cep290rd16/J m 24697.0 0.0   1   0.0 0.0 24697.0, 24697.0 -0.56
BXD28/TyJ m 32499.0 9494.0   2   6713.0 0.292 25786.0, 39212.0 0.14
BXD29-Tlr4lps-2J/J m 31534.0 0.0   1   0.0 0.0 31534.0, 31534.0 0.05
BXD2/TyJ m 50187.0 0.0   1   0.0 0.0 50187.0, 50187.0 1.72
BXD32/TyJ m 40203.0 0.0   1   0.0 0.0 40203.0, 40203.0 0.83
BXD33/TyJ m 42988.0 0.0   1   0.0 0.0 42988.0, 42988.0 1.07
BXD34/TyJ m 24229.0 0.0   1   0.0 0.0 24229.0, 24229.0 -0.61
BXD36/TyJ m 20770.0 0.0   1   0.0 0.0 20770.0, 20770.0 -0.92
BXD38/TyJ m 16335.0 0.0   1   0.0 0.0 16335.0, 16335.0 -1.31
BXD39/TyJ m 27119.0 0.0   1   0.0 0.0 27119.0, 27119.0 -0.35
BXD40/TyJ m 30896.0 0.0   1   0.0 0.0 30896.0, 30896.0 -0.01
BXD42/TyJ m 14696.0 0.0   1   0.0 0.0 14696.0, 14696.0 -1.46
BXD5/TyJ m 23342.0 0.0   1   0.0 0.0 23342.0, 23342.0 -0.68
BXD6/TyJ m 21489.0 0.0   1   0.0 0.0 21489.0, 21489.0 -0.85
BXD8/TyJ m 21035.0 0.0   1   0.0 0.0 21035.0, 21035.0 -0.89
BXD9/TyJ m 18692.0 0.0   1   0.0 0.0 18692.0, 18692.0 -1.1
BXH10/TyJ m 16194.0 0.0   1   0.0 0.0 16194.0, 16194.0 -1.32
BXH19/TyJ m 37797.0 0.0   1   0.0 0.0 37797.0, 37797.0 0.61
BXH20/KccJ m 48993.0 0.0   1   0.0 0.0 48993.0, 48993.0 1.61
BXH22/KccJ m 30622.0 0.0   1   0.0 0.0 30622.0, 30622.0 -0.03
BXH2/TyJ m 30139.0 0.0   1   0.0 0.0 30139.0, 30139.0 -0.08
BXH4/TyJ m 25984.0 7161.0   2   5063.0 0.276 20921.0, 31048.0 -0.45
BXH6/TyJ m 36502.0 0.0   1   0.0 0.0 36502.0, 36502.0 0.49
BXH7/TyJ m 31900.0 0.0   1   0.0 0.0 31900.0, 31900.0 0.08
BXH9/TyJ m 25004.0 0.0   1   0.0 0.0 25004.0, 25004.0 -0.54
C3H/HeJ m 31282.0 944.0   2   668.0 0.0302 30615.0, 31950.0 0.03
C57BL/6J m 44875.0 7288.0   5 3259.0 0.162 36639.0, 55319.0 1.24
C57L/J m 12575.0 0.0   1   0.0 0.0 12575.0, 12575.0 -1.65
C58/J m 55988.0 0.0   1   0.0 0.0 55988.0, 55988.0 2.24
CAST/EiJ m 36748.0 0.0   1   0.0 0.0 36748.0, 36748.0 0.52
CBA/J m 25761.0 0.0   1   0.0 0.0 25761.0, 25761.0 -0.47
CE/J m 36738.0 0.0   1   0.0 0.0 36738.0, 36738.0 0.51
CXB11/HiAJ m 27440.0 1832.0   2   1296.0 0.0668 26144.0, 28736.0 -0.32
CXB12/HiAJ m 29075.0 7187.0   2   5082.0 0.247 23993.0, 34156.0 -0.17
CXB13/HiAJ m 44246.0 17967.0   3 10373.0 0.406 24064.0, 58501.0 1.19
CXB1/ByJ m 32830.0 9332.0   3 5388.0 0.284 22152.0, 39419.0 0.16
CXB2/ByJ m 44765.0 13689.0   3 7904.0 0.306 31395.0, 58753.0 1.23
CXB3/ByJ m 30831.0 4362.0   2   3085.0 0.141 27747.0, 33916.0 -0.01
CXB4/ByJ m 23015.0 7690.0   2   5437.0 0.334 17578.0, 28452.0 -0.71
CXB6/ByJ m 37610.0 17121.0   3 9885.0 0.455 25101.0, 57122.0 0.59
CXB7/ByJ m 47516.0 19898.0   2   14070.0 0.419 33446.0, 61586.0 1.48
CXB8/HiAJ m 53068.0 22198.0   3 12816.0 0.418 32499.0, 76598.0 1.98
CXB9/HiAJ m 44715.0 4305.0   3 2485.0 0.0963 40791.0, 49320.0 1.23
DBA/2J m 22636.0 3974.0   3 2294.0 0.176 19583.0, 27129.0 -0.75
FVB/NJ m 14125.0 0.0   1   0.0 0.0 14125.0, 14125.0 -1.51
I/LnJ m 40259.0 0.0   1   0.0 0.0 40259.0, 40259.0 0.83
KK/HlJ m 24680.0 0.0   1   0.0 0.0 24680.0, 24680.0 -0.56
LG/J m 29044.0 0.0   1   0.0 0.0 29044.0, 29044.0 -0.17
LP/J m 15475.0 0.0   1   0.0 0.0 15475.0, 15475.0 -1.39
MA/MyJ m 18431.0 0.0   1   0.0 0.0 18431.0, 18431.0 -1.12
NOD/ShiLtJ m 33622.0 0.0   1   0.0 0.0 33622.0, 33622.0 0.24
NON/ShiLtJ m 33998.0 0.0   1   0.0 0.0 33998.0, 33998.0 0.27
NZW/LacJ m 18575.0 0.0   1   0.0 0.0 18575.0, 18575.0 -1.11
PL/J m 40195.0 0.0   1   0.0 0.0 40195.0, 40195.0 0.82
RIIIS/J m 28719.0 0.0   1   0.0 0.0 28719.0, 28719.0 -0.2
SEA/GnJ m 42128.0 0.0   1   0.0 0.0 42128.0, 42128.0 1.0
SM/J m 20220.0 0.0   1   0.0 0.0 20220.0, 20220.0 -0.96
SWR/J m 47820.0 0.0   1   0.0 0.0 47820.0, 47820.0 1.51


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 24546.75 7713.0699 40239.1086 8854.3914
AXB19b/PgnJ m 48753.45 7713.0699 64445.8086 33061.0914
AXB24/PgnJ m 21051.15 7713.0699 36743.5086 5358.7914
BALB/cJ m 33537.7333 6297.6952 46350.4905 20724.9762
BXA16/PgnJ m 27556.65 7713.0699 43249.0086 11864.2914
BXD19/TyJ m 28665.85 7713.0699 44358.2086 12973.4914
BXD28/TyJ m 32499.0 7713.0699 48191.3586 16806.6414
BXH4/TyJ m 25984.15 7713.0699 41676.5086 10291.7914
C3H/HeJ m 31282.45 7713.0699 46974.8086 15590.0914
C57BL/6J m 44875.18 4878.1737 54799.899 34950.461
CXB11/HiAJ m 27439.95 7713.0699 43132.3086 11747.5914
CXB12/HiAJ m 29074.7 7713.0699 44767.0586 13382.3414
CXB13/HiAJ m 44245.5667 6297.6952 57058.3238 31432.8095
CXB1/ByJ m 32829.8 6297.6952 45642.5571 20017.0429
CXB2/ByJ m 44765.3667 6297.6952 57578.1238 31952.6095
CXB3/ByJ m 30831.4 7713.0699 46523.7586 15139.0414
CXB4/ByJ m 23015.15 7713.0699 38707.5086 7322.7914
CXB6/ByJ m 37610.5 6297.6952 50423.2571 24797.7429
CXB7/ByJ m 47515.75 7713.0699 63208.1086 31823.3914
CXB8/HiAJ m 53068.0667 6297.6952 65880.8238 40255.3095
CXB9/HiAJ m 44715.2 6297.6952 57527.9571 31902.4429
DBA/2J m 22635.7 6297.6952 35448.4571 9822.9429




  GWAS USING LINEAR MIXED MODELS