Project measure / variable:   HMDPpheno10   uridine

ID, description, units MPD:50522   uridine   uridine (16h fast), relative abundance    
Data set, strains HMDPpheno10   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

HMDPpheno10 - uridine (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means929580   None
Median of the strain means933257   None
SD of the strain means± 162605
Coefficient of variation (CV)0.175
Min–max range of strain means295191   –   1341270   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 457520183156.087 21786675388.3851 1.2292 0.2892
Residuals 34 602612865087.054 17723907796.6781


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 1124494.0 0.0   1   0.0 0.0 1124494.0, 1124494.0 1.2
A/J m 985911.0 77143.0   2   54548.0 0.0782 931363.0, 1040460.0 0.35
AKR/J m 955929.0 0.0   1   0.0 0.0 955929.0, 955929.0 0.16
AXB10/PgnJ m 818187.0 0.0   1   0.0 0.0 818187.0, 818187.0 -0.69
AXB12/PgnJ m 865063.0 0.0   1   0.0 0.0 865063.0, 865063.0 -0.4
AXB13/PgnJ m 1035135.0 0.0   1   0.0 0.0 1035135.0, 1035135.0 0.65
AXB15/PgnJ m 1057551.0 0.0   1   0.0 0.0 1057551.0, 1057551.0 0.79
AXB19a/PgnJ m 943762.0 0.0   1   0.0 0.0 943762.0, 943762.0 0.09
AXB19b/PgnJ m 978643.0 177248.0   2   125333.0 0.181 853310.0, 1103976.0 0.3
AXB19/PgnJ m 904933.0 0.0   1   0.0 0.0 904933.0, 904933.0 -0.15
AXB1/PgnJ m 645095.0 0.0   1   0.0 0.0 645095.0, 645095.0 -1.75
AXB23/PgnJ m 1230064.0 0.0   1   0.0 0.0 1230064.0, 1230064.0 1.85
AXB24/PgnJ m 916995.0 33951.0   2   24007.0 0.037 892988.0, 941002.0 -0.08
AXB2/PgnJ m 1109756.0 0.0   1   0.0 0.0 1109756.0, 1109756.0 1.11
AXB4/PgnJ m 715868.0 0.0   1   0.0 0.0 715868.0, 715868.0 -1.31
AXB5/PgnJ m 927541.0 0.0   1   0.0 0.0 927541.0, 927541.0 -0.01
AXB6/PgnJ m 1237721.0 0.0   1   0.0 0.0 1237721.0, 1237721.0 1.9
AXB8/PgnJ m 937408.0 0.0   1   0.0 0.0 937408.0, 937408.0 0.05
BALB/cJ m 1075384.0 81445.0   3 47022.0 0.0757 981796.0, 1130195.0 0.9
BTBR T+ Itpr3tf/J m 840376.0 0.0   1   0.0 0.0 840376.0, 840376.0 -0.55
BUB/BnJ m 880222.0 0.0   1   0.0 0.0 880222.0, 880222.0 -0.3
BXA11/PgnJ m 972673.0 0.0   1   0.0 0.0 972673.0, 972673.0 0.27
BXA12/PgnJ m 919008.0 0.0   1   0.0 0.0 919008.0, 919008.0 -0.07
BXA13/PgnJ m 1034210.0 0.0   1   0.0 0.0 1034210.0, 1034210.0 0.64
BXA14/PgnJ m 835927.0 0.0   1   0.0 0.0 835927.0, 835927.0 -0.58
BXA16/PgnJ m 929106.0 64565.0   2   45654.0 0.0695 883451.0, 974760.0 0.0
BXA1/PgnJ m 895160.0 0.0   1   0.0 0.0 895160.0, 895160.0 -0.21
BXA24/PgnJ m 946447.0 0.0   1   0.0 0.0 946447.0, 946447.0 0.1
BXA25/PgnJ m 927463.0 0.0   1   0.0 0.0 927463.0, 927463.0 -0.01
BXA26/PgnJ m 1043490.0 0.0   1   0.0 0.0 1043490.0, 1043490.0 0.7
BXA2/PgnJ m 996717.0 0.0   1   0.0 0.0 996717.0, 996717.0 0.41
BXA4/PgnJ m 842397.0 0.0   1   0.0 0.0 842397.0, 842397.0 -0.54
BXA7/PgnJ m 1059871.0 0.0   1   0.0 0.0 1059871.0, 1059871.0 0.8
BXA8/PgnJ m 1036930.0 0.0   1   0.0 0.0 1036930.0, 1036930.0 0.66
BXD11/TyJ m 956810.0 0.0   1   0.0 0.0 956810.0, 956810.0 0.17
BXD12/TyJ m 1206514.0 0.0   1   0.0 0.0 1206514.0, 1206514.0 1.7
BXD13/TyJ m 926305.0 0.0   1   0.0 0.0 926305.0, 926305.0 -0.02
BXD14/TyJ m 1079186.0 0.0   1   0.0 0.0 1079186.0, 1079186.0 0.92
BXD15/TyJ m 961638.0 0.0   1   0.0 0.0 961638.0, 961638.0 0.2
BXD18/TyJ m 960283.0 0.0   1   0.0 0.0 960283.0, 960283.0 0.19
BXD19/TyJ m 1017108.0 123625.0   2   87416.0 0.122 929693.0, 1104524.0 0.54
BXD1/TyJ m 735185.0 0.0   1   0.0 0.0 735185.0, 735185.0 -1.2
BXD20/TyJ m 798558.0 0.0   1   0.0 0.0 798558.0, 798558.0 -0.81
BXD21/TyJ m 975942.0 0.0   1   0.0 0.0 975942.0, 975942.0 0.29
BXD22/TyJ m 1064632.0 0.0   1   0.0 0.0 1064632.0, 1064632.0 0.83
BXD24/TyJ m 824497.0 0.0   1   0.0 0.0 824497.0, 824497.0 -0.65
BXD24/TyJ-Cep290rd16/J m 789757.0 0.0   1   0.0 0.0 789757.0, 789757.0 -0.86
BXD28/TyJ m 905476.0 43611.0   2   30838.0 0.0482 874638.0, 936314.0 -0.15
BXD29-Tlr4lps-2J/J m 997495.0 0.0   1   0.0 0.0 997495.0, 997495.0 0.42
BXD2/TyJ m 965973.0 0.0   1   0.0 0.0 965973.0, 965973.0 0.22
BXD32/TyJ m 964797.0 0.0   1   0.0 0.0 964797.0, 964797.0 0.22
BXD33/TyJ m 629716.0 0.0   1   0.0 0.0 629716.0, 629716.0 -1.84
BXD34/TyJ m 884802.0 0.0   1   0.0 0.0 884802.0, 884802.0 -0.28
BXD36/TyJ m 901823.0 0.0   1   0.0 0.0 901823.0, 901823.0 -0.17
BXD38/TyJ m 694434.0 0.0   1   0.0 0.0 694434.0, 694434.0 -1.45
BXD39/TyJ m 775276.0 0.0   1   0.0 0.0 775276.0, 775276.0 -0.95
BXD40/TyJ m 924625.0 0.0   1   0.0 0.0 924625.0, 924625.0 -0.03
BXD42/TyJ m 880033.0 0.0   1   0.0 0.0 880033.0, 880033.0 -0.3
BXD5/TyJ m 753979.0 0.0   1   0.0 0.0 753979.0, 753979.0 -1.08
BXD6/TyJ m 1036635.0 0.0   1   0.0 0.0 1036635.0, 1036635.0 0.66
BXD8/TyJ m 870381.0 0.0   1   0.0 0.0 870381.0, 870381.0 -0.36
BXD9/TyJ m 950041.0 0.0   1   0.0 0.0 950041.0, 950041.0 0.13
BXH10/TyJ m 637626.0 0.0   1   0.0 0.0 637626.0, 637626.0 -1.8
BXH19/TyJ m 910500.0 0.0   1   0.0 0.0 910500.0, 910500.0 -0.12
BXH20/KccJ m 1145855.0 0.0   1   0.0 0.0 1145855.0, 1145855.0 1.33
BXH22/KccJ m 943687.0 0.0   1   0.0 0.0 943687.0, 943687.0 0.09
BXH2/TyJ m 957756.0 0.0   1   0.0 0.0 957756.0, 957756.0 0.17
BXH4/TyJ m 1005734.0 113587.0   2   80318.0 0.113 925416.0, 1086052.0 0.47
BXH6/TyJ m 628304.0 0.0   1   0.0 0.0 628304.0, 628304.0 -1.85
BXH7/TyJ m 803998.0 0.0   1   0.0 0.0 803998.0, 803998.0 -0.77
BXH8/TyJ m 819993.0 0.0   1   0.0 0.0 819993.0, 819993.0 -0.67
BXH9/TyJ m 824357.0 0.0   1   0.0 0.0 824357.0, 824357.0 -0.65
C3H/HeJ m 886551.0 39376.0   2   27843.0 0.0444 858708.0, 914394.0 -0.26
C57BL/6J m 928372.0 73584.0   5 32908.0 0.0793 818599.0, 1008302.0 -0.01
C57L/J m 699804.0 0.0   1   0.0 0.0 699804.0, 699804.0 -1.41
C58/J m 295191.0 0.0   1   0.0 0.0 295191.0, 295191.0 -3.9
CAST/EiJ m 1107361.0 0.0   1   0.0 0.0 1107361.0, 1107361.0 1.09
CBA/J m 806389.0 0.0   1   0.0 0.0 806389.0, 806389.0 -0.76
CE/J m 515426.0 0.0   1   0.0 0.0 515426.0, 515426.0 -2.55
CXB11/HiAJ m 1077336.0 182736.0   2   129214.0 0.17 948123.0, 1206550.0 0.91
CXB12/HiAJ m 1070516.0 21291.0   2   15055.0 0.0199 1055461.0, 1085572.0 0.87
CXB13/HiAJ m 857848.0 251941.0   3 145458.0 0.294 569290.0, 1034142.0 -0.44
CXB1/ByJ m 884019.0 250119.0   3 144406.0 0.283 613202.0, 1106334.0 -0.28
CXB2/ByJ m 970212.0 102219.0   3 59016.0 0.105 868372.0, 1072806.0 0.25
CXB3/ByJ m 1049804.0 68766.0   2   48625.0 0.0655 1001179.0, 1098429.0 0.74
CXB4/ByJ m 925211.0 19963.0   2   14116.0 0.0216 911095.0, 939326.0 -0.03
CXB6/ByJ m 1115599.0 31908.0   3 18422.0 0.0286 1092544.0, 1152016.0 1.14
CXB7/ByJ m 1070629.0 98553.0   2   69688.0 0.0921 1000942.0, 1140317.0 0.87
CXB8/HiAJ m 899567.0 282872.0   3 163316.0 0.314 578534.0, 1112235.0 -0.18
CXB9/HiAJ m 1187838.0 63155.0   3 36463.0 0.0532 1115006.0, 1227454.0 1.59
DBA/2J m 898274.0 23555.0   4 11778.0 0.0262 863445.0, 915490.0 -0.19
FVB/NJ m 1341270.0 0.0   1   0.0 0.0 1341270.0, 1341270.0 2.53
I/LnJ m 419969.0 0.0   1   0.0 0.0 419969.0, 419969.0 -3.13
KK/HlJ m 834630.0 0.0   1   0.0 0.0 834630.0, 834630.0 -0.58
LG/J m 920360.0 0.0   1   0.0 0.0 920360.0, 920360.0 -0.06
LP/J m 881697.0 0.0   1   0.0 0.0 881697.0, 881697.0 -0.29
MA/MyJ m 973034.0 0.0   1   0.0 0.0 973034.0, 973034.0 0.27
NOD/ShiLtJ m 1037957.0 0.0   1   0.0 0.0 1037957.0, 1037957.0 0.67
NON/ShiLtJ m 1084508.0 0.0   1   0.0 0.0 1084508.0, 1084508.0 0.95
NZW/LacJ m 1001955.0 0.0   1   0.0 0.0 1001955.0, 1001955.0 0.45
PL/J m 1144048.0 0.0   1   0.0 0.0 1144048.0, 1144048.0 1.32
RIIIS/J m 1125075.0 0.0   1   0.0 0.0 1125075.0, 1125075.0 1.2
SEA/GnJ m 1120101.0 0.0   1   0.0 0.0 1120101.0, 1120101.0 1.17
SJL/J m 750384.0 0.0   1   0.0 0.0 750384.0, 750384.0 -1.1
SM/J m 1060428.0 0.0   1   0.0 0.0 1060428.0, 1060428.0 0.8
SWR/J m 858943.0 0.0   1   0.0 0.0 858943.0, 858943.0 -0.43


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 985911.35 94137.9514 1177222.6849 794600.0151
AXB19b/PgnJ m 978643.2 94137.9514 1169954.5349 787331.8651
AXB24/PgnJ m 916995.25 94137.9514 1108306.5849 725683.9151
BALB/cJ m 1075384.1333 76863.3155 1231589.1842 919179.0825
BXA16/PgnJ m 929105.5 94137.9514 1120416.8349 737794.1651
BXD19/TyJ m 1017108.35 94137.9514 1208419.6849 825797.0151
BXD28/TyJ m 905475.85 94137.9514 1096787.1849 714164.5151
BXH4/TyJ m 1005733.8 94137.9514 1197045.1349 814422.4651
C3H/HeJ m 886550.75 94137.9514 1077862.0849 695239.4151
C57BL/6J m 928371.88 59538.0682 1049367.7921 807375.9679
CXB11/HiAJ m 1077336.3 94137.9514 1268647.6349 886024.9651
CXB12/HiAJ m 1070516.25 94137.9514 1261827.5849 879204.9151
CXB13/HiAJ m 857848.0667 76863.3155 1014053.1175 701643.0158
CXB1/ByJ m 884018.7333 76863.3155 1040223.7842 727813.6825
CXB2/ByJ m 970211.6 76863.3155 1126416.6508 814006.5492
CXB3/ByJ m 1049804.25 94137.9514 1241115.5849 858492.9151
CXB4/ByJ m 925210.65 94137.9514 1116521.9849 733899.3151
CXB6/ByJ m 1115599.4667 76863.3155 1271804.5175 959394.4158
CXB7/ByJ m 1070629.45 94137.9514 1261940.7849 879318.1151
CXB8/HiAJ m 899566.9 76863.3155 1055771.9508 743361.8492
CXB9/HiAJ m 1187837.8667 76863.3155 1344042.9175 1031632.8158
DBA/2J m 898273.575 66565.5838 1033551.1172 762996.0328




  GWAS USING LINEAR MIXED MODELS