Project measure / variable:   HMDPpheno10   AMP_5

ID, description, units MPD:50511   AMP_5   liver adenosine 5'-monophosphate (AMP) (16h fast), relative abundance    
Data set, strains HMDPpheno10   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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HMDPpheno10 - liver adenosine 5'-monophosphate (AMP) (16h fast), relative abundance

BXH19/TyJLG/JMA/MyJC3H/HeJBXA8/PgnJAXB8/PgnJCXB1/ByJBUB/BnJ129X1/SvJBXH8/TyJNZW/LacJBXH6/TyJBXA14/PgnJAXB13/PgnJFVB/NJBXH4/TyJNOD/ShiLtJAXB19a/PgnJBXD34/TyJBALB/cJCBA/JBTBR T<+> Itpr3<tf>/JAXB6/PgnJCE/JPL/JLP/JBXA2/PgnJBXD19/TyJBXH2/TyJCXB4/ByJAXB10/PgnJAXB19/PgnJBXA24/PgnJAXB5/PgnJCXB8/HiAJCXB13/HiAJBXA7/PgnJBXH20/KccJBXD6/TyJBXD5/TyJRIIIS/JCXB7/ByJBXD11/TyJCAST/EiJBXD22/TyJBXA11/PgnJAXB12/PgnJBXA1/PgnJBXD9/TyJSEA/GnJAXB4/PgnJCXB3/ByJBXD14/TyJBXD32/TyJBXD36/TyJNON/ShiLtJBXD24/TyJ-Cep290<rd16>/JAXB15/PgnJBXH22/KccJSWR/JBXD13/TyJBXD40/TyJBXA16/PgnJSJL/JBXA13/PgnJBXH10/TyJAXB19b/PgnJC57BL/6JCXB2/ByJAXB23/PgnJAXB2/PgnJBXD15/TyJBXD24/TyJBXD2/TyJBXH9/TyJA/JBXD39/TyJCXB11/HiAJSM/JI/LnJBXD42/TyJCXB12/HiAJBXD29-Tlr4<lps-2J>/JC57L/JBXD33/TyJBXD20/TyJBXD1/TyJCXB9/HiAJDBA/2JBXD28/TyJBXD18/TyJBXA4/PgnJBXA25/PgnJAKR/JBXH7/TyJCXB6/ByJBXA26/PgnJBXD38/TyJAXB24/PgnJC58/JAXB1/PgnJKK/HlJBXD12/TyJBXD8/TyJBXA12/PgnJBXD21/TyJ (no units) 200,000250,000300,000350,000400,000450,000500,000550,000600,000650,000700,000750,000femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means395948   None
Median of the strain means383064   None
SD of the strain means± 97268
Coefficient of variation (CV)0.246
Min–max range of strain means219613   –   762356   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 339364728925.436 16160225186.9255 5.607 < 0.0001
Residuals 34 97992310266.6575 2882126772.5487


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 106 (106)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129X1/SvJ m 521551.0 0.0   1   0.0 0.0 521551.0, 521551.0 1.29
A/J m 338936.0 40174.0   2   28408.0 0.119 310528.0, 367344.0 -0.59
AKR/J m 300228.0 0.0   1   0.0 0.0 300228.0, 300228.0 -0.98
AXB10/PgnJ m 423455.0 0.0   1   0.0 0.0 423455.0, 423455.0 0.28
AXB12/PgnJ m 390582.0 0.0   1   0.0 0.0 390582.0, 390582.0 -0.06
AXB13/PgnJ m 490920.0 0.0   1   0.0 0.0 490920.0, 490920.0 0.98
AXB15/PgnJ m 377978.0 0.0   1   0.0 0.0 377978.0, 377978.0 -0.18
AXB19a/PgnJ m 468492.0 0.0   1   0.0 0.0 468492.0, 468492.0 0.75
AXB19b/PgnJ m 361210.0 89444.0   2   63247.0 0.248 297963.0, 424457.0 -0.36
AXB19/PgnJ m 421841.0 0.0   1   0.0 0.0 421841.0, 421841.0 0.27
AXB1/PgnJ m 278617.0 0.0   1   0.0 0.0 278617.0, 278617.0 -1.21
AXB23/PgnJ m 348609.0 0.0   1   0.0 0.0 348609.0, 348609.0 -0.49
AXB24/PgnJ m 286605.0 70979.0   2   50190.0 0.248 236415.0, 336795.0 -1.12
AXB2/PgnJ m 345711.0 0.0   1   0.0 0.0 345711.0, 345711.0 -0.52
AXB4/PgnJ m 387142.0 0.0   1   0.0 0.0 387142.0, 387142.0 -0.09
AXB5/PgnJ m 415288.0 0.0   1   0.0 0.0 415288.0, 415288.0 0.2
AXB6/PgnJ m 461265.0 0.0   1   0.0 0.0 461265.0, 461265.0 0.67
AXB8/PgnJ m 540993.0 0.0   1   0.0 0.0 540993.0, 540993.0 1.49
BALB/cJ m 467069.0 44897.0   3 25921.0 0.0961 435451.0, 518459.0 0.73
BTBR T+ Itpr3tf/J m 465740.0 0.0   1   0.0 0.0 465740.0, 465740.0 0.72
BUB/BnJ m 521680.0 0.0   1   0.0 0.0 521680.0, 521680.0 1.29
BXA11/PgnJ m 391114.0 0.0   1   0.0 0.0 391114.0, 391114.0 -0.05
BXA12/PgnJ m 221287.0 0.0   1   0.0 0.0 221287.0, 221287.0 -1.8
BXA13/PgnJ m 367998.0 0.0   1   0.0 0.0 367998.0, 367998.0 -0.29
BXA14/PgnJ m 496582.0 0.0   1   0.0 0.0 496582.0, 496582.0 1.03
BXA16/PgnJ m 368864.0 39805.0   2   28146.0 0.108 340718.0, 397010.0 -0.28
BXA1/PgnJ m 389812.0 0.0   1   0.0 0.0 389812.0, 389812.0 -0.06
BXA24/PgnJ m 415571.0 0.0   1   0.0 0.0 415571.0, 415571.0 0.2
BXA25/PgnJ m 303064.0 0.0   1   0.0 0.0 303064.0, 303064.0 -0.95
BXA26/PgnJ m 291107.0 0.0   1   0.0 0.0 291107.0, 291107.0 -1.08
BXA2/PgnJ m 443535.0 0.0   1   0.0 0.0 443535.0, 443535.0 0.49
BXA4/PgnJ m 303079.0 0.0   1   0.0 0.0 303079.0, 303079.0 -0.95
BXA7/PgnJ m 406685.0 0.0   1   0.0 0.0 406685.0, 406685.0 0.11
BXA8/PgnJ m 555122.0 0.0   1   0.0 0.0 555122.0, 555122.0 1.64
BXD11/TyJ m 394700.0 0.0   1   0.0 0.0 394700.0, 394700.0 -0.01
BXD12/TyJ m 258445.0 0.0   1   0.0 0.0 258445.0, 258445.0 -1.41
BXD13/TyJ m 374494.0 0.0   1   0.0 0.0 374494.0, 374494.0 -0.22
BXD14/TyJ m 383321.0 0.0   1   0.0 0.0 383321.0, 383321.0 -0.13
BXD15/TyJ m 343151.0 0.0   1   0.0 0.0 343151.0, 343151.0 -0.54
BXD18/TyJ m 303127.0 0.0   1   0.0 0.0 303127.0, 303127.0 -0.95
BXD19/TyJ m 439484.0 22498.0   2   15908.0 0.0512 423575.0, 455392.0 0.45
BXD1/TyJ m 315663.0 0.0   1   0.0 0.0 315663.0, 315663.0 -0.83
BXD20/TyJ m 319554.0 0.0   1   0.0 0.0 319554.0, 319554.0 -0.79
BXD21/TyJ m 219613.0 0.0   1   0.0 0.0 219613.0, 219613.0 -1.81
BXD22/TyJ m 393062.0 0.0   1   0.0 0.0 393062.0, 393062.0 -0.03
BXD24/TyJ m 343013.0 0.0   1   0.0 0.0 343013.0, 343013.0 -0.54
BXD24/TyJ-Cep290rd16/J m 378356.0 0.0   1   0.0 0.0 378356.0, 378356.0 -0.18
BXD28/TyJ m 310118.0 33438.0   2   23644.0 0.108 286474.0, 333762.0 -0.88
BXD29-Tlr4lps-2J/J m 331140.0 0.0   1   0.0 0.0 331140.0, 331140.0 -0.67
BXD2/TyJ m 341435.0 0.0   1   0.0 0.0 341435.0, 341435.0 -0.56
BXD32/TyJ m 382807.0 0.0   1   0.0 0.0 382807.0, 382807.0 -0.14
BXD33/TyJ m 321901.0 0.0   1   0.0 0.0 321901.0, 321901.0 -0.76
BXD34/TyJ m 467366.0 0.0   1   0.0 0.0 467366.0, 467366.0 0.73
BXD36/TyJ m 381852.0 0.0   1   0.0 0.0 381852.0, 381852.0 -0.14
BXD38/TyJ m 287482.0 0.0   1   0.0 0.0 287482.0, 287482.0 -1.12
BXD39/TyJ m 338915.0 0.0   1   0.0 0.0 338915.0, 338915.0 -0.59
BXD40/TyJ m 371270.0 0.0   1   0.0 0.0 371270.0, 371270.0 -0.25
BXD42/TyJ m 333673.0 0.0   1   0.0 0.0 333673.0, 333673.0 -0.64
BXD5/TyJ m 404860.0 0.0   1   0.0 0.0 404860.0, 404860.0 0.09
BXD6/TyJ m 405581.0 0.0   1   0.0 0.0 405581.0, 405581.0 0.1
BXD8/TyJ m 235004.0 0.0   1   0.0 0.0 235004.0, 235004.0 -1.65
BXD9/TyJ m 388551.0 0.0   1   0.0 0.0 388551.0, 388551.0 -0.08
BXH10/TyJ m 364770.0 0.0   1   0.0 0.0 364770.0, 364770.0 -0.32
BXH19/TyJ m 762356.0 0.0   1   0.0 0.0 762356.0, 762356.0 3.77
BXH20/KccJ m 406286.0 0.0   1   0.0 0.0 406286.0, 406286.0 0.11
BXH22/KccJ m 377744.0 0.0   1   0.0 0.0 377744.0, 377744.0 -0.19
BXH2/TyJ m 430458.0 0.0   1   0.0 0.0 430458.0, 430458.0 0.35
BXH4/TyJ m 479022.0 131637.0   2   93081.0 0.275 385941.0, 572104.0 0.85
BXH6/TyJ m 509130.0 0.0   1   0.0 0.0 509130.0, 509130.0 1.16
BXH7/TyJ m 299892.0 0.0   1   0.0 0.0 299892.0, 299892.0 -0.99
BXH8/TyJ m 521445.0 0.0   1   0.0 0.0 521445.0, 521445.0 1.29
BXH9/TyJ m 339886.0 0.0   1   0.0 0.0 339886.0, 339886.0 -0.58
C3H/HeJ m 621394.0 7810.0   2   5523.0 0.0126 615872.0, 626917.0 2.32
C57BL/6J m 360209.0 28542.0   5 12764.0 0.0792 333321.0, 406994.0 -0.37
C57L/J m 329853.0 0.0   1   0.0 0.0 329853.0, 329853.0 -0.68
C58/J m 286454.0 0.0   1   0.0 0.0 286454.0, 286454.0 -1.13
CAST/EiJ m 394334.0 0.0   1   0.0 0.0 394334.0, 394334.0 -0.02
CBA/J m 467013.0 0.0   1   0.0 0.0 467013.0, 467013.0 0.73
CE/J m 457991.0 0.0   1   0.0 0.0 457991.0, 457991.0 0.64
CXB11/HiAJ m 336503.0 73702.0   2   52115.0 0.219 284387.0, 388618.0 -0.61
CXB12/HiAJ m 332172.0 759.0   2   537.0 0.00229 331635.0, 332709.0 -0.66
CXB13/HiAJ m 410564.0 70474.0   3 40688.0 0.172 364973.0, 491735.0 0.15
CXB1/ByJ m 526895.0 95181.0   3 54953.0 0.181 446196.0, 631860.0 1.35
CXB2/ByJ m 357999.0 46912.0   3 27085.0 0.131 303904.0, 387519.0 -0.39
CXB3/ByJ m 385369.0 34851.0   2   24643.0 0.0904 360726.0, 410013.0 -0.11
CXB4/ByJ m 430406.0 19873.0   2   14052.0 0.0462 416353.0, 444458.0 0.35
CXB6/ByJ m 291827.0 34876.0   3 20136.0 0.12 254445.0, 323490.0 -1.07
CXB7/ByJ m 399220.0 21769.0   2   15393.0 0.0545 383827.0, 414613.0 0.03
CXB8/HiAJ m 412314.0 70370.0   3 40628.0 0.171 366384.0, 493330.0 0.17
CXB9/HiAJ m 314964.0 7899.0   3 4560.0 0.0251 306775.0, 322536.0 -0.83
DBA/2J m 311058.0 31734.0   4 15867.0 0.102 286009.0, 357268.0 -0.87
FVB/NJ m 483015.0 0.0   1   0.0 0.0 483015.0, 483015.0 0.9
I/LnJ m 333930.0 0.0   1   0.0 0.0 333930.0, 333930.0 -0.64
KK/HlJ m 272390.0 0.0   1   0.0 0.0 272390.0, 272390.0 -1.27
LG/J m 749638.0 0.0   1   0.0 0.0 749638.0, 749638.0 3.64
LP/J m 450870.0 0.0   1   0.0 0.0 450870.0, 450870.0 0.56
MA/MyJ m 741431.0 0.0   1   0.0 0.0 741431.0, 741431.0 3.55
NOD/ShiLtJ m 471274.0 0.0   1   0.0 0.0 471274.0, 471274.0 0.77
NON/ShiLtJ m 378699.0 0.0   1   0.0 0.0 378699.0, 378699.0 -0.18
NZW/LacJ m 512751.0 0.0   1   0.0 0.0 512751.0, 512751.0 1.2
PL/J m 455731.0 0.0   1   0.0 0.0 455731.0, 455731.0 0.61
RIIIS/J m 399996.0 0.0   1   0.0 0.0 399996.0, 399996.0 0.04
SEA/GnJ m 388202.0 0.0   1   0.0 0.0 388202.0, 388202.0 -0.08
SJL/J m 368078.0 0.0   1   0.0 0.0 368078.0, 368078.0 -0.29
SM/J m 334584.0 0.0   1   0.0 0.0 334584.0, 334584.0 -0.63
SWR/J m 376724.0 0.0   1   0.0 0.0 376724.0, 376724.0 -0.2


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 338935.9 37961.3407 416082.6262 261789.1738
AXB19b/PgnJ m 361210.2 37961.3407 438356.9262 284063.4738
AXB24/PgnJ m 286604.6 37961.3407 363751.3262 209457.8738
BALB/cJ m 467069.4 30995.3049 530059.4381 404079.3619
BXA16/PgnJ m 368864.35 37961.3407 446011.0762 291717.6238
BXD19/TyJ m 439483.75 37961.3407 516630.4762 362337.0238
BXD28/TyJ m 310118.1 37961.3407 387264.8262 232971.3738
BXH4/TyJ m 479022.5 37961.3407 556169.2262 401875.7738
C3H/HeJ m 621394.35 37961.3407 698541.0762 544247.6238
C57BL/6J m 360208.7 24008.8599 409000.5737 311416.8263
CXB11/HiAJ m 336502.65 37961.3407 413649.3762 259355.9238
CXB12/HiAJ m 332172.05 37961.3407 409318.7762 255025.3238
CXB13/HiAJ m 410563.9 30995.3049 473553.9381 347573.8619
CXB1/ByJ m 526895.4667 30995.3049 589885.5048 463905.4285
CXB2/ByJ m 357998.5333 30995.3049 420988.5715 295008.4952
CXB3/ByJ m 385369.4 37961.3407 462516.1262 308222.6738
CXB4/ByJ m 430405.55 37961.3407 507552.2762 353258.8238
CXB6/ByJ m 291827.4667 30995.3049 354817.5048 228837.4285
CXB7/ByJ m 399220.2 37961.3407 476366.9262 322073.4738
CXB8/HiAJ m 412314.3 30995.3049 475304.3381 349324.2619
CXB9/HiAJ m 314964.4 30995.3049 377954.4381 251974.3619
DBA/2J m 311057.975 26842.7214 365608.9482 256507.0018




  GWAS USING LINEAR MIXED MODELS

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