Project measure / variable:   HMDPpheno10   AMP_5

ID, description, units MPD:50511   AMP_5   liver adenosine 5'-monophosphate (AMP) (16h fast), relative abundance    
Data set, strains HMDPpheno10   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno10 - liver adenosine 5'-monophosphate (AMP) (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means395948   None
Median of the strain means383064   None
SD of the strain means± 97268
Coefficient of variation (CV)0.246
Min–max range of strain means219613   –   762356   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 339364728925.436 16160225186.9255 5.607 < 0.0001
Residuals 34 97992310266.6575 2882126772.5487


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 521551.0 0.0   1   0.0 0.0 521551.0, 521551.0 1.29
A/J m 338936.0 40174.0   2   28408.0 0.119 310528.0, 367344.0 -0.59
AKR/J m 300228.0 0.0   1   0.0 0.0 300228.0, 300228.0 -0.98
AXB10/PgnJ m 423455.0 0.0   1   0.0 0.0 423455.0, 423455.0 0.28
AXB12/PgnJ m 390582.0 0.0   1   0.0 0.0 390582.0, 390582.0 -0.06
AXB13/PgnJ m 490920.0 0.0   1   0.0 0.0 490920.0, 490920.0 0.98
AXB15/PgnJ m 377978.0 0.0   1   0.0 0.0 377978.0, 377978.0 -0.18
AXB19a/PgnJ m 468492.0 0.0   1   0.0 0.0 468492.0, 468492.0 0.75
AXB19b/PgnJ m 361210.0 89444.0   2   63247.0 0.248 297963.0, 424457.0 -0.36
AXB19/PgnJ m 421841.0 0.0   1   0.0 0.0 421841.0, 421841.0 0.27
AXB1/PgnJ m 278617.0 0.0   1   0.0 0.0 278617.0, 278617.0 -1.21
AXB23/PgnJ m 348609.0 0.0   1   0.0 0.0 348609.0, 348609.0 -0.49
AXB24/PgnJ m 286605.0 70979.0   2   50190.0 0.248 236415.0, 336795.0 -1.12
AXB2/PgnJ m 345711.0 0.0   1   0.0 0.0 345711.0, 345711.0 -0.52
AXB4/PgnJ m 387142.0 0.0   1   0.0 0.0 387142.0, 387142.0 -0.09
AXB5/PgnJ m 415288.0 0.0   1   0.0 0.0 415288.0, 415288.0 0.2
AXB6/PgnJ m 461265.0 0.0   1   0.0 0.0 461265.0, 461265.0 0.67
AXB8/PgnJ m 540993.0 0.0   1   0.0 0.0 540993.0, 540993.0 1.49
BALB/cJ m 467069.0 44897.0   3 25921.0 0.0961 435451.0, 518459.0 0.73
BTBR T+ Itpr3tf/J m 465740.0 0.0   1   0.0 0.0 465740.0, 465740.0 0.72
BUB/BnJ m 521680.0 0.0   1   0.0 0.0 521680.0, 521680.0 1.29
BXA11/PgnJ m 391114.0 0.0   1   0.0 0.0 391114.0, 391114.0 -0.05
BXA12/PgnJ m 221287.0 0.0   1   0.0 0.0 221287.0, 221287.0 -1.8
BXA13/PgnJ m 367998.0 0.0   1   0.0 0.0 367998.0, 367998.0 -0.29
BXA14/PgnJ m 496582.0 0.0   1   0.0 0.0 496582.0, 496582.0 1.03
BXA16/PgnJ m 368864.0 39805.0   2   28146.0 0.108 340718.0, 397010.0 -0.28
BXA1/PgnJ m 389812.0 0.0   1   0.0 0.0 389812.0, 389812.0 -0.06
BXA24/PgnJ m 415571.0 0.0   1   0.0 0.0 415571.0, 415571.0 0.2
BXA25/PgnJ m 303064.0 0.0   1   0.0 0.0 303064.0, 303064.0 -0.95
BXA26/PgnJ m 291107.0 0.0   1   0.0 0.0 291107.0, 291107.0 -1.08
BXA2/PgnJ m 443535.0 0.0   1   0.0 0.0 443535.0, 443535.0 0.49
BXA4/PgnJ m 303079.0 0.0   1   0.0 0.0 303079.0, 303079.0 -0.95
BXA7/PgnJ m 406685.0 0.0   1   0.0 0.0 406685.0, 406685.0 0.11
BXA8/PgnJ m 555122.0 0.0   1   0.0 0.0 555122.0, 555122.0 1.64
BXD11/TyJ m 394700.0 0.0   1   0.0 0.0 394700.0, 394700.0 -0.01
BXD12/TyJ m 258445.0 0.0   1   0.0 0.0 258445.0, 258445.0 -1.41
BXD13/TyJ m 374494.0 0.0   1   0.0 0.0 374494.0, 374494.0 -0.22
BXD14/TyJ m 383321.0 0.0   1   0.0 0.0 383321.0, 383321.0 -0.13
BXD15/TyJ m 343151.0 0.0   1   0.0 0.0 343151.0, 343151.0 -0.54
BXD18/TyJ m 303127.0 0.0   1   0.0 0.0 303127.0, 303127.0 -0.95
BXD19/TyJ m 439484.0 22498.0   2   15908.0 0.0512 423575.0, 455392.0 0.45
BXD1/TyJ m 315663.0 0.0   1   0.0 0.0 315663.0, 315663.0 -0.83
BXD20/TyJ m 319554.0 0.0   1   0.0 0.0 319554.0, 319554.0 -0.79
BXD21/TyJ m 219613.0 0.0   1   0.0 0.0 219613.0, 219613.0 -1.81
BXD22/TyJ m 393062.0 0.0   1   0.0 0.0 393062.0, 393062.0 -0.03
BXD24/TyJ m 343013.0 0.0   1   0.0 0.0 343013.0, 343013.0 -0.54
BXD24/TyJ-Cep290rd16/J m 378356.0 0.0   1   0.0 0.0 378356.0, 378356.0 -0.18
BXD28/TyJ m 310118.0 33438.0   2   23644.0 0.108 286474.0, 333762.0 -0.88
BXD29-Tlr4lps-2J/J m 331140.0 0.0   1   0.0 0.0 331140.0, 331140.0 -0.67
BXD2/TyJ m 341435.0 0.0   1   0.0 0.0 341435.0, 341435.0 -0.56
BXD32/TyJ m 382807.0 0.0   1   0.0 0.0 382807.0, 382807.0 -0.14
BXD33/TyJ m 321901.0 0.0   1   0.0 0.0 321901.0, 321901.0 -0.76
BXD34/TyJ m 467366.0 0.0   1   0.0 0.0 467366.0, 467366.0 0.73
BXD36/TyJ m 381852.0 0.0   1   0.0 0.0 381852.0, 381852.0 -0.14
BXD38/TyJ m 287482.0 0.0   1   0.0 0.0 287482.0, 287482.0 -1.12
BXD39/TyJ m 338915.0 0.0   1   0.0 0.0 338915.0, 338915.0 -0.59
BXD40/TyJ m 371270.0 0.0   1   0.0 0.0 371270.0, 371270.0 -0.25
BXD42/TyJ m 333673.0 0.0   1   0.0 0.0 333673.0, 333673.0 -0.64
BXD5/TyJ m 404860.0 0.0   1   0.0 0.0 404860.0, 404860.0 0.09
BXD6/TyJ m 405581.0 0.0   1   0.0 0.0 405581.0, 405581.0 0.1
BXD8/TyJ m 235004.0 0.0   1   0.0 0.0 235004.0, 235004.0 -1.65
BXD9/TyJ m 388551.0 0.0   1   0.0 0.0 388551.0, 388551.0 -0.08
BXH10/TyJ m 364770.0 0.0   1   0.0 0.0 364770.0, 364770.0 -0.32
BXH19/TyJ m 762356.0 0.0   1   0.0 0.0 762356.0, 762356.0 3.77
BXH20/KccJ m 406286.0 0.0   1   0.0 0.0 406286.0, 406286.0 0.11
BXH22/KccJ m 377744.0 0.0   1   0.0 0.0 377744.0, 377744.0 -0.19
BXH2/TyJ m 430458.0 0.0   1   0.0 0.0 430458.0, 430458.0 0.35
BXH4/TyJ m 479022.0 131637.0   2   93081.0 0.275 385941.0, 572104.0 0.85
BXH6/TyJ m 509130.0 0.0   1   0.0 0.0 509130.0, 509130.0 1.16
BXH7/TyJ m 299892.0 0.0   1   0.0 0.0 299892.0, 299892.0 -0.99
BXH8/TyJ m 521445.0 0.0   1   0.0 0.0 521445.0, 521445.0 1.29
BXH9/TyJ m 339886.0 0.0   1   0.0 0.0 339886.0, 339886.0 -0.58
C3H/HeJ m 621394.0 7810.0   2   5523.0 0.0126 615872.0, 626917.0 2.32
C57BL/6J m 360209.0 28542.0   5 12764.0 0.0792 333321.0, 406994.0 -0.37
C57L/J m 329853.0 0.0   1   0.0 0.0 329853.0, 329853.0 -0.68
C58/J m 286454.0 0.0   1   0.0 0.0 286454.0, 286454.0 -1.13
CAST/EiJ m 394334.0 0.0   1   0.0 0.0 394334.0, 394334.0 -0.02
CBA/J m 467013.0 0.0   1   0.0 0.0 467013.0, 467013.0 0.73
CE/J m 457991.0 0.0   1   0.0 0.0 457991.0, 457991.0 0.64
CXB11/HiAJ m 336503.0 73702.0   2   52115.0 0.219 284387.0, 388618.0 -0.61
CXB12/HiAJ m 332172.0 759.0   2   537.0 0.00229 331635.0, 332709.0 -0.66
CXB13/HiAJ m 410564.0 70474.0   3 40688.0 0.172 364973.0, 491735.0 0.15
CXB1/ByJ m 526895.0 95181.0   3 54953.0 0.181 446196.0, 631860.0 1.35
CXB2/ByJ m 357999.0 46912.0   3 27085.0 0.131 303904.0, 387519.0 -0.39
CXB3/ByJ m 385369.0 34851.0   2   24643.0 0.0904 360726.0, 410013.0 -0.11
CXB4/ByJ m 430406.0 19873.0   2   14052.0 0.0462 416353.0, 444458.0 0.35
CXB6/ByJ m 291827.0 34876.0   3 20136.0 0.12 254445.0, 323490.0 -1.07
CXB7/ByJ m 399220.0 21769.0   2   15393.0 0.0545 383827.0, 414613.0 0.03
CXB8/HiAJ m 412314.0 70370.0   3 40628.0 0.171 366384.0, 493330.0 0.17
CXB9/HiAJ m 314964.0 7899.0   3 4560.0 0.0251 306775.0, 322536.0 -0.83
DBA/2J m 311058.0 31734.0   4 15867.0 0.102 286009.0, 357268.0 -0.87
FVB/NJ m 483015.0 0.0   1   0.0 0.0 483015.0, 483015.0 0.9
I/LnJ m 333930.0 0.0   1   0.0 0.0 333930.0, 333930.0 -0.64
KK/HlJ m 272390.0 0.0   1   0.0 0.0 272390.0, 272390.0 -1.27
LG/J m 749638.0 0.0   1   0.0 0.0 749638.0, 749638.0 3.64
LP/J m 450870.0 0.0   1   0.0 0.0 450870.0, 450870.0 0.56
MA/MyJ m 741431.0 0.0   1   0.0 0.0 741431.0, 741431.0 3.55
NOD/ShiLtJ m 471274.0 0.0   1   0.0 0.0 471274.0, 471274.0 0.77
NON/ShiLtJ m 378699.0 0.0   1   0.0 0.0 378699.0, 378699.0 -0.18
NZW/LacJ m 512751.0 0.0   1   0.0 0.0 512751.0, 512751.0 1.2
PL/J m 455731.0 0.0   1   0.0 0.0 455731.0, 455731.0 0.61
RIIIS/J m 399996.0 0.0   1   0.0 0.0 399996.0, 399996.0 0.04
SEA/GnJ m 388202.0 0.0   1   0.0 0.0 388202.0, 388202.0 -0.08
SJL/J m 368078.0 0.0   1   0.0 0.0 368078.0, 368078.0 -0.29
SM/J m 334584.0 0.0   1   0.0 0.0 334584.0, 334584.0 -0.63
SWR/J m 376724.0 0.0   1   0.0 0.0 376724.0, 376724.0 -0.2


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 338935.9 37961.3407 416082.6262 261789.1738
AXB19b/PgnJ m 361210.2 37961.3407 438356.9262 284063.4738
AXB24/PgnJ m 286604.6 37961.3407 363751.3262 209457.8738
BALB/cJ m 467069.4 30995.3049 530059.4381 404079.3619
BXA16/PgnJ m 368864.35 37961.3407 446011.0762 291717.6238
BXD19/TyJ m 439483.75 37961.3407 516630.4762 362337.0238
BXD28/TyJ m 310118.1 37961.3407 387264.8262 232971.3738
BXH4/TyJ m 479022.5 37961.3407 556169.2262 401875.7738
C3H/HeJ m 621394.35 37961.3407 698541.0762 544247.6238
C57BL/6J m 360208.7 24008.8599 409000.5737 311416.8263
CXB11/HiAJ m 336502.65 37961.3407 413649.3762 259355.9238
CXB12/HiAJ m 332172.05 37961.3407 409318.7762 255025.3238
CXB13/HiAJ m 410563.9 30995.3049 473553.9381 347573.8619
CXB1/ByJ m 526895.4667 30995.3049 589885.5048 463905.4285
CXB2/ByJ m 357998.5333 30995.3049 420988.5715 295008.4952
CXB3/ByJ m 385369.4 37961.3407 462516.1262 308222.6738
CXB4/ByJ m 430405.55 37961.3407 507552.2762 353258.8238
CXB6/ByJ m 291827.4667 30995.3049 354817.5048 228837.4285
CXB7/ByJ m 399220.2 37961.3407 476366.9262 322073.4738
CXB8/HiAJ m 412314.3 30995.3049 475304.3381 349324.2619
CXB9/HiAJ m 314964.4 30995.3049 377954.4381 251974.3619
DBA/2J m 311057.975 26842.7214 365608.9482 256507.0018




  GWAS USING LINEAR MIXED MODELS