Project measure / variable:   HMDPpheno10   adenosine

ID, description, units MPD:50508   adenosine   adenosine (16h fast), relative abundance    
Data set, strains HMDPpheno10   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno10 - adenosine (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means282186   None
Median of the strain means284572   None
SD of the strain means± 59033
Coefficient of variation (CV)0.209
Min–max range of strain means108061   –   498399   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 57819128192.4618 2753291818.6887 1.3317 0.2233
Residuals 34 70293971255.2295 2067469742.8009


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 320627.0 0.0   1   0.0 0.0 320627.0, 320627.0 0.65
A/J m 271205.0 21165.0   2   14966.0 0.078 256240.0, 286171.0 -0.19
AKR/J m 231146.0 0.0   1   0.0 0.0 231146.0, 231146.0 -0.86
AXB10/PgnJ m 298748.0 0.0   1   0.0 0.0 298748.0, 298748.0 0.28
AXB12/PgnJ m 302471.0 0.0   1   0.0 0.0 302471.0, 302471.0 0.34
AXB13/PgnJ m 352768.0 0.0   1   0.0 0.0 352768.0, 352768.0 1.2
AXB15/PgnJ m 235187.0 0.0   1   0.0 0.0 235187.0, 235187.0 -0.8
AXB19a/PgnJ m 286510.0 0.0   1   0.0 0.0 286510.0, 286510.0 0.07
AXB19b/PgnJ m 285173.0 27441.0   2   19404.0 0.0962 265769.0, 304576.0 0.05
AXB19/PgnJ m 279402.0 0.0   1   0.0 0.0 279402.0, 279402.0 -0.05
AXB1/PgnJ m 131400.0 0.0   1   0.0 0.0 131400.0, 131400.0 -2.55
AXB23/PgnJ m 310667.0 0.0   1   0.0 0.0 310667.0, 310667.0 0.48
AXB24/PgnJ m 275982.0 67744.0   2   47902.0 0.245 228080.0, 323884.0 -0.11
AXB2/PgnJ m 220746.0 0.0   1   0.0 0.0 220746.0, 220746.0 -1.04
AXB4/PgnJ m 288362.0 0.0   1   0.0 0.0 288362.0, 288362.0 0.1
AXB5/PgnJ m 275906.0 0.0   1   0.0 0.0 275906.0, 275906.0 -0.11
AXB6/PgnJ m 360113.0 0.0   1   0.0 0.0 360113.0, 360113.0 1.32
AXB8/PgnJ m 301105.0 0.0   1   0.0 0.0 301105.0, 301105.0 0.32
BALB/cJ m 285329.0 23043.0   3 13304.0 0.0808 262212.0, 308298.0 0.05
BTBR T+ Itpr3tf/J m 224883.0 0.0   1   0.0 0.0 224883.0, 224883.0 -0.97
BUB/BnJ m 179775.0 0.0   1   0.0 0.0 179775.0, 179775.0 -1.73
BXA11/PgnJ m 272737.0 0.0   1   0.0 0.0 272737.0, 272737.0 -0.16
BXA12/PgnJ m 204544.0 0.0   1   0.0 0.0 204544.0, 204544.0 -1.32
BXA13/PgnJ m 291049.0 0.0   1   0.0 0.0 291049.0, 291049.0 0.15
BXA14/PgnJ m 279580.0 0.0   1   0.0 0.0 279580.0, 279580.0 -0.04
BXA16/PgnJ m 290160.0 42517.0   2   30064.0 0.147 260096.0, 320224.0 0.14
BXA1/PgnJ m 296310.0 0.0   1   0.0 0.0 296310.0, 296310.0 0.24
BXA24/PgnJ m 314576.0 0.0   1   0.0 0.0 314576.0, 314576.0 0.55
BXA25/PgnJ m 209198.0 0.0   1   0.0 0.0 209198.0, 209198.0 -1.24
BXA26/PgnJ m 265000.0 0.0   1   0.0 0.0 265000.0, 265000.0 -0.29
BXA2/PgnJ m 292886.0 0.0   1   0.0 0.0 292886.0, 292886.0 0.18
BXA4/PgnJ m 171142.0 0.0   1   0.0 0.0 171142.0, 171142.0 -1.88
BXA7/PgnJ m 266173.0 0.0   1   0.0 0.0 266173.0, 266173.0 -0.27
BXA8/PgnJ m 365512.0 0.0   1   0.0 0.0 365512.0, 365512.0 1.41
BXD11/TyJ m 305819.0 0.0   1   0.0 0.0 305819.0, 305819.0 0.4
BXD12/TyJ m 296569.0 0.0   1   0.0 0.0 296569.0, 296569.0 0.24
BXD13/TyJ m 267585.0 0.0   1   0.0 0.0 267585.0, 267585.0 -0.25
BXD14/TyJ m 401144.0 0.0   1   0.0 0.0 401144.0, 401144.0 2.02
BXD15/TyJ m 226399.0 0.0   1   0.0 0.0 226399.0, 226399.0 -0.95
BXD18/TyJ m 275883.0 0.0   1   0.0 0.0 275883.0, 275883.0 -0.11
BXD19/TyJ m 354828.0 343.0   2   242.0 0.000966 354585.0, 355070.0 1.23
BXD1/TyJ m 277062.0 0.0   1   0.0 0.0 277062.0, 277062.0 -0.09
BXD20/TyJ m 321059.0 0.0   1   0.0 0.0 321059.0, 321059.0 0.66
BXD21/TyJ m 242845.0 0.0   1   0.0 0.0 242845.0, 242845.0 -0.67
BXD22/TyJ m 270518.0 0.0   1   0.0 0.0 270518.0, 270518.0 -0.2
BXD24/TyJ m 238083.0 0.0   1   0.0 0.0 238083.0, 238083.0 -0.75
BXD24/TyJ-Cep290rd16/J m 274326.0 0.0   1   0.0 0.0 274326.0, 274326.0 -0.13
BXD28/TyJ m 299173.0 4471.0   2   3162.0 0.0149 296011.0, 302334.0 0.29
BXD29-Tlr4lps-2J/J m 268452.0 0.0   1   0.0 0.0 268452.0, 268452.0 -0.23
BXD2/TyJ m 315098.0 0.0   1   0.0 0.0 315098.0, 315098.0 0.56
BXD32/TyJ m 239306.0 0.0   1   0.0 0.0 239306.0, 239306.0 -0.73
BXD33/TyJ m 218168.0 0.0   1   0.0 0.0 218168.0, 218168.0 -1.08
BXD34/TyJ m 108061.0 0.0   1   0.0 0.0 108061.0, 108061.0 -2.95
BXD36/TyJ m 341488.0 0.0   1   0.0 0.0 341488.0, 341488.0 1.0
BXD38/TyJ m 210396.0 0.0   1   0.0 0.0 210396.0, 210396.0 -1.22
BXD39/TyJ m 271399.0 0.0   1   0.0 0.0 271399.0, 271399.0 -0.18
BXD40/TyJ m 373511.0 0.0   1   0.0 0.0 373511.0, 373511.0 1.55
BXD42/TyJ m 269381.0 0.0   1   0.0 0.0 269381.0, 269381.0 -0.22
BXD5/TyJ m 286995.0 0.0   1   0.0 0.0 286995.0, 286995.0 0.08
BXD6/TyJ m 286309.0 0.0   1   0.0 0.0 286309.0, 286309.0 0.07
BXD8/TyJ m 180738.0 0.0   1   0.0 0.0 180738.0, 180738.0 -1.72
BXD9/TyJ m 218458.0 0.0   1   0.0 0.0 218458.0, 218458.0 -1.08
BXH10/TyJ m 344414.0 0.0   1   0.0 0.0 344414.0, 344414.0 1.05
BXH19/TyJ m 240400.0 0.0   1   0.0 0.0 240400.0, 240400.0 -0.71
BXH20/KccJ m 339797.0 0.0   1   0.0 0.0 339797.0, 339797.0 0.98
BXH22/KccJ m 270637.0 0.0   1   0.0 0.0 270637.0, 270637.0 -0.2
BXH2/TyJ m 283972.0 0.0   1   0.0 0.0 283972.0, 283972.0 0.03
BXH4/TyJ m 369447.0 18417.0   2   13023.0 0.0499 356424.0, 382470.0 1.48
BXH6/TyJ m 281802.0 0.0   1   0.0 0.0 281802.0, 281802.0 -0.01
BXH7/TyJ m 283703.0 0.0   1   0.0 0.0 283703.0, 283703.0 0.03
BXH8/TyJ m 285894.0 0.0   1   0.0 0.0 285894.0, 285894.0 0.06
BXH9/TyJ m 253759.0 0.0   1   0.0 0.0 253759.0, 253759.0 -0.48
C3H/HeJ m 292819.0 31637.0   2   22371.0 0.108 270448.0, 315190.0 0.18
C57BL/6J m 273205.0 31856.0   5 14246.0 0.117 233619.0, 322399.0 -0.15
C57L/J m 207439.0 0.0   1   0.0 0.0 207439.0, 207439.0 -1.27
C58/J m 138642.0 0.0   1   0.0 0.0 138642.0, 138642.0 -2.43
CAST/EiJ m 424696.0 0.0   1   0.0 0.0 424696.0, 424696.0 2.41
CBA/J m 306020.0 0.0   1   0.0 0.0 306020.0, 306020.0 0.4
CE/J m 262613.0 0.0   1   0.0 0.0 262613.0, 262613.0 -0.33
CXB11/HiAJ m 327595.0 70421.0   2   49795.0 0.215 277800.0, 377390.0 0.77
CXB12/HiAJ m 267012.0 70070.0   2   49547.0 0.262 217465.0, 316558.0 -0.26
CXB13/HiAJ m 293986.0 27643.0   3 15960.0 0.094 262132.0, 311680.0 0.2
CXB1/ByJ m 352268.0 88070.0   3 50847.0 0.25 298019.0, 453885.0 1.19
CXB2/ByJ m 301929.0 25281.0   3 14596.0 0.0837 286587.0, 331108.0 0.33
CXB3/ByJ m 259407.0 15587.0   2   11021.0 0.0601 248386.0, 270429.0 -0.39
CXB4/ByJ m 360787.0 874.0   2   618.0 0.00242 360169.0, 361405.0 1.33
CXB6/ByJ m 259924.0 62173.0   3 35895.0 0.239 217642.0, 331311.0 -0.38
CXB7/ByJ m 301420.0 34365.0   2   24300.0 0.114 277121.0, 325720.0 0.33
CXB8/HiAJ m 304881.0 86721.0   3 50069.0 0.284 215899.0, 389149.0 0.38
CXB9/HiAJ m 348395.0 38342.0   3 22137.0 0.11 321880.0, 392359.0 1.12
DBA/2J m 300275.0 17219.0   4 8610.0 0.0573 279135.0, 319284.0 0.31
FVB/NJ m 156484.0 0.0   1   0.0 0.0 156484.0, 156484.0 -2.13
I/LnJ m 285555.0 0.0   1   0.0 0.0 285555.0, 285555.0 0.06
KK/HlJ m 498399.0 0.0   1   0.0 0.0 498399.0, 498399.0 3.66
LG/J m 300793.0 0.0   1   0.0 0.0 300793.0, 300793.0 0.32
LP/J m 272016.0 0.0   1   0.0 0.0 272016.0, 272016.0 -0.17
MA/MyJ m 398432.0 0.0   1   0.0 0.0 398432.0, 398432.0 1.97
NOD/ShiLtJ m 256473.0 0.0   1   0.0 0.0 256473.0, 256473.0 -0.44
NON/ShiLtJ m 309965.0 0.0   1   0.0 0.0 309965.0, 309965.0 0.47
NZW/LacJ m 256939.0 0.0   1   0.0 0.0 256939.0, 256939.0 -0.43
PL/J m 305977.0 0.0   1   0.0 0.0 305977.0, 305977.0 0.4
RIIIS/J m 322510.0 0.0   1   0.0 0.0 322510.0, 322510.0 0.68
SEA/GnJ m 309951.0 0.0   1   0.0 0.0 309951.0, 309951.0 0.47
SJL/J m 346678.0 0.0   1   0.0 0.0 346678.0, 346678.0 1.09
SM/J m 235268.0 0.0   1   0.0 0.0 235268.0, 235268.0 -0.79
SWR/J m 243753.0 0.0   1   0.0 0.0 243753.0, 243753.0 -0.65


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 271205.15 32151.7476 336545.3625 205864.9375
AXB19b/PgnJ m 285172.65 32151.7476 350512.8625 219832.4375
AXB24/PgnJ m 275981.55 32151.7476 341321.7625 210641.3375
BALB/cJ m 285329.0333 26251.792 338679.0934 231978.9733
BXA16/PgnJ m 290160.2 32151.7476 355500.4125 224819.9875
BXD19/TyJ m 354827.8 32151.7476 420168.0125 289487.5875
BXD28/TyJ m 299172.55 32151.7476 364512.7625 233832.3375
BXH4/TyJ m 369447.4 32151.7476 434787.6125 304107.1875
C3H/HeJ m 292818.85 32151.7476 358159.0625 227478.6375
C57BL/6J m 273204.66 20334.5506 314529.4388 231879.8812
CXB11/HiAJ m 327595.05 32151.7476 392935.2625 262254.8375
CXB12/HiAJ m 267011.65 32151.7476 332351.8625 201671.4375
CXB13/HiAJ m 293986.4667 26251.792 347336.5267 240636.4066
CXB1/ByJ m 352268.3 26251.792 405618.3601 298918.2399
CXB2/ByJ m 301929.1333 26251.792 355279.1934 248579.0733
CXB3/ByJ m 259407.35 32151.7476 324747.5625 194067.1375
CXB4/ByJ m 360787.05 32151.7476 426127.2625 295446.8375
CXB6/ByJ m 259923.9667 26251.792 313274.0267 206573.9066
CXB7/ByJ m 301420.25 32151.7476 366760.4625 236080.0375
CXB8/HiAJ m 304881.1667 26251.792 358231.2267 251531.1066
CXB9/HiAJ m 348395.4333 26251.792 401745.4934 295045.3733
DBA/2J m 300274.625 22734.7187 346477.1323 254072.1177




  GWAS USING LINEAR MIXED MODELS