Project measure / variable:   HMDPpheno10   adenine

ID, description, units MPD:50507   adenine   adenine (16h fast), relative abundance    
Data set, strains HMDPpheno10   HMDP   105 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno10 - adenine (16h fast), relative abundance

KK/HlJCAST/EiJBXH10/TyJCXB6/ByJBXH19/TyJBXA14/PgnJSWR/JCXB11/HiAJAXB19b/PgnJCXB2/ByJBTBR T<+> Itpr3<tf>/JBXD14/TyJCXB13/HiAJC57BL/6JAXB8/PgnJAXB2/PgnJNON/ShiLtJBXD38/TyJBXD29-Tlr4<lps-2J>/JPL/JBXD5/TyJC3H/HeJFVB/NJCXB8/HiAJSM/JBXD36/TyJDBA/2JBXD9/TyJBXD19/TyJAXB19a/PgnJBXD42/TyJNOD/ShiLtJCXB9/HiAJBXD13/TyJBXD24/TyJBXA13/PgnJBXD2/TyJBXD1/TyJBXH4/TyJAXB15/PgnJBXD24/TyJ-Cep290<rd16>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 (no units) 50,000100,000150,000200,000250,000300,000350,000400,000450,000500,000550,000femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested105 strains
Mean of the strain means100250   None
Median of the strain means89767   None
SD of the strain means± 60040
Coefficient of variation (CV)0.599
Min–max range of strain means32267   –   527110   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 63781665853.9146 3037222183.5197 1.178 0.3274
Residuals 34 87660110806.4047 2578238553.1296


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 105 (105)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129X1/SvJ m 92266.0 0.0   1   0.0 0.0 92266.0, 92266.0 -0.13
A/J m 58168.0 10967.0   2   7755.0 0.189 50413.0, 65923.0 -0.7
AKR/J m 81508.0 0.0   1   0.0 0.0 81508.0, 81508.0 -0.31
AXB10/PgnJ m 53747.0 0.0   1   0.0 0.0 53747.0, 53747.0 -0.77
AXB12/PgnJ m 57181.0 0.0   1   0.0 0.0 57181.0, 57181.0 -0.72
AXB13/PgnJ m 67496.0 0.0   1   0.0 0.0 67496.0, 67496.0 -0.55
AXB15/PgnJ m 98442.0 0.0   1   0.0 0.0 98442.0, 98442.0 -0.03
AXB19a/PgnJ m 111034.0 0.0   1   0.0 0.0 111034.0, 111034.0 0.18
AXB19b/PgnJ m 140688.0 26677.0   2   18864.0 0.19 121824.0, 159552.0 0.67
AXB19/PgnJ m 91001.0 0.0   1   0.0 0.0 91001.0, 91001.0 -0.15
AXB1/PgnJ m 32267.0 0.0   1   0.0 0.0 32267.0, 32267.0 -1.13
AXB23/PgnJ m 49343.0 0.0   1   0.0 0.0 49343.0, 49343.0 -0.85
AXB24/PgnJ m 73339.0 7608.0   2   5380.0 0.104 67960.0, 78719.0 -0.45
AXB2/PgnJ m 131269.0 0.0   1   0.0 0.0 131269.0, 131269.0 0.52
AXB4/PgnJ m 83467.0 0.0   1   0.0 0.0 83467.0, 83467.0 -0.28
AXB5/PgnJ m 68089.0 0.0   1   0.0 0.0 68089.0, 68089.0 -0.54
AXB6/PgnJ m 64181.0 0.0   1   0.0 0.0 64181.0, 64181.0 -0.6
AXB8/PgnJ m 132954.0 0.0   1   0.0 0.0 132954.0, 132954.0 0.54
BALB/cJ m 91687.0 7159.0   3 4133.0 0.0781 86086.0, 99753.0 -0.14
BTBR T+ Itpr3tf/J m 136435.0 0.0   1   0.0 0.0 136435.0, 136435.0 0.6
BUB/BnJ m 82602.0 0.0   1   0.0 0.0 82602.0, 82602.0 -0.29
BXA11/PgnJ m 43517.0 0.0   1   0.0 0.0 43517.0, 43517.0 -0.94
BXA12/PgnJ m 72858.0 0.0   1   0.0 0.0 72858.0, 72858.0 -0.46
BXA13/PgnJ m 100512.0 0.0   1   0.0 0.0 100512.0, 100512.0 0.0
BXA14/PgnJ m 145203.0 0.0   1   0.0 0.0 145203.0, 145203.0 0.75
BXA16/PgnJ m 53604.0 28337.0   2   20037.0 0.529 33567.0, 73641.0 -0.78
BXA1/PgnJ m 61802.0 0.0   1   0.0 0.0 61802.0, 61802.0 -0.64
BXA24/PgnJ m 66650.0 0.0   1   0.0 0.0 66650.0, 66650.0 -0.56
BXA25/PgnJ m 71139.0 0.0   1   0.0 0.0 71139.0, 71139.0 -0.48
BXA26/PgnJ m 90944.0 0.0   1   0.0 0.0 90944.0, 90944.0 -0.15
BXA2/PgnJ m 78355.0 0.0   1   0.0 0.0 78355.0, 78355.0 -0.36
BXA4/PgnJ m 58797.0 0.0   1   0.0 0.0 58797.0, 58797.0 -0.69
BXA7/PgnJ m 80152.0 0.0   1   0.0 0.0 80152.0, 80152.0 -0.33
BXA8/PgnJ m 82810.0 0.0   1   0.0 0.0 82810.0, 82810.0 -0.29
BXD11/TyJ m 59765.0 0.0   1   0.0 0.0 59765.0, 59765.0 -0.67
BXD12/TyJ m 83706.0 0.0   1   0.0 0.0 83706.0, 83706.0 -0.28
BXD13/TyJ m 105231.0 0.0   1   0.0 0.0 105231.0, 105231.0 0.08
BXD14/TyJ m 135426.0 0.0   1   0.0 0.0 135426.0, 135426.0 0.59
BXD15/TyJ m 86180.0 0.0   1   0.0 0.0 86180.0, 86180.0 -0.23
BXD18/TyJ m 38977.0 0.0   1   0.0 0.0 38977.0, 38977.0 -1.02
BXD19/TyJ m 113392.0 38189.0   2   27003.0 0.337 86388.0, 140395.0 0.22
BXD1/TyJ m 98935.0 0.0   1   0.0 0.0 98935.0, 98935.0 -0.02
BXD21/TyJ m 74720.0 0.0   1   0.0 0.0 74720.0, 74720.0 -0.43
BXD22/TyJ m 86451.0 0.0   1   0.0 0.0 86451.0, 86451.0 -0.23
BXD24/TyJ m 103938.0 0.0   1   0.0 0.0 103938.0, 103938.0 0.06
BXD24/TyJ-Cep290rd16/J m 94057.0 0.0   1   0.0 0.0 94057.0, 94057.0 -0.1
BXD28/TyJ m 75114.0 8185.0   2   5788.0 0.109 69326.0, 80901.0 -0.42
BXD29-Tlr4lps-2J/J m 128884.0 0.0   1   0.0 0.0 128884.0, 128884.0 0.48
BXD2/TyJ m 99815.0 0.0   1   0.0 0.0 99815.0, 99815.0 -0.01
BXD32/TyJ m 82198.0 0.0   1   0.0 0.0 82198.0, 82198.0 -0.3
BXD33/TyJ m 62075.0 0.0   1   0.0 0.0 62075.0, 62075.0 -0.64
BXD34/TyJ m 74565.0 0.0   1   0.0 0.0 74565.0, 74565.0 -0.43
BXD36/TyJ m 116542.0 0.0   1   0.0 0.0 116542.0, 116542.0 0.27
BXD38/TyJ m 130892.0 0.0   1   0.0 0.0 130892.0, 130892.0 0.51
BXD39/TyJ m 91596.0 0.0   1   0.0 0.0 91596.0, 91596.0 -0.14
BXD40/TyJ m 69043.0 0.0   1   0.0 0.0 69043.0, 69043.0 -0.52
BXD42/TyJ m 108960.0 0.0   1   0.0 0.0 108960.0, 108960.0 0.15
BXD5/TyJ m 128283.0 0.0   1   0.0 0.0 128283.0, 128283.0 0.47
BXD6/TyJ m 69586.0 0.0   1   0.0 0.0 69586.0, 69586.0 -0.51
BXD8/TyJ m 35759.0 0.0   1   0.0 0.0 35759.0, 35759.0 -1.07
BXD9/TyJ m 113950.0 0.0   1   0.0 0.0 113950.0, 113950.0 0.23
BXH10/TyJ m 231849.0 0.0   1   0.0 0.0 231849.0, 231849.0 2.19
BXH19/TyJ m 151696.0 0.0   1   0.0 0.0 151696.0, 151696.0 0.86
BXH20/KccJ m 65613.0 0.0   1   0.0 0.0 65613.0, 65613.0 -0.58
BXH22/KccJ m 62646.0 0.0   1   0.0 0.0 62646.0, 62646.0 -0.63
BXH2/TyJ m 79702.0 0.0   1   0.0 0.0 79702.0, 79702.0 -0.34
BXH4/TyJ m 98499.0 26706.0   2   18884.0 0.271 79615.0, 117383.0 -0.03
BXH6/TyJ m 91995.0 0.0   1   0.0 0.0 91995.0, 91995.0 -0.14
BXH7/TyJ m 76253.0 0.0   1   0.0 0.0 76253.0, 76253.0 -0.4
BXH8/TyJ m 89767.0 0.0   1   0.0 0.0 89767.0, 89767.0 -0.17
BXH9/TyJ m 58490.0 0.0   1   0.0 0.0 58490.0, 58490.0 -0.7
C3H/HeJ m 127974.0 48792.0   2   34501.0 0.381 93473.0, 162476.0 0.46
C57BL/6J m 134553.0 63987.0   5 28616.0 0.476 59492.0, 230227.0 0.57
C57L/J m 79818.0 0.0   1   0.0 0.0 79818.0, 79818.0 -0.34
C58/J m 82750.0 0.0   1   0.0 0.0 82750.0, 82750.0 -0.29
CAST/EiJ m 382989.0 0.0   1   0.0 0.0 382989.0, 382989.0 4.71
CBA/J m 92863.0 0.0   1   0.0 0.0 92863.0, 92863.0 -0.12
CE/J m 83868.0 0.0   1   0.0 0.0 83868.0, 83868.0 -0.27
CXB11/HiAJ m 142433.0 39892.0   2   28208.0 0.28 114225.0, 170641.0 0.7
CXB12/HiAJ m 52283.0 638.0   2   451.0 0.0122 51832.0, 52735.0 -0.8
CXB13/HiAJ m 135197.0 112151.0   3 64750.0 0.83 58726.0, 263942.0 0.58
CXB1/ByJ m 93095.0 20831.0   3 12027.0 0.224 71884.0, 113523.0 -0.12
CXB2/ByJ m 138099.0 83394.0   3 48147.0 0.604 62996.0, 227844.0 0.63
CXB3/ByJ m 91303.0 56020.0   2   39612.0 0.614 51692.0, 130915.0 -0.15
CXB4/ByJ m 72257.0 16313.0   2   11535.0 0.226 60722.0, 83792.0 -0.47
CXB6/ByJ m 188468.0 82296.0   3 47514.0 0.437 103697.0, 268043.0 1.47
CXB7/ByJ m 67517.0 9578.0   2   6773.0 0.142 60744.0, 74290.0 -0.55
CXB8/HiAJ m 122958.0 16657.0   3 9617.0 0.135 108431.0, 141138.0 0.38
CXB9/HiAJ m 107960.0 44222.0   3 25532.0 0.41 67002.0, 154848.0 0.13
DBA/2J m 115261.0 24744.0   4 12372.0 0.215 92926.0, 138573.0 0.25
FVB/NJ m 125228.0 0.0   1   0.0 0.0 125228.0, 125228.0 0.42
I/LnJ m 78541.0 0.0   1   0.0 0.0 78541.0, 78541.0 -0.36
KK/HlJ m 527110.0 0.0   1   0.0 0.0 527110.0, 527110.0 7.11
LG/J m 87502.0 0.0   1   0.0 0.0 87502.0, 87502.0 -0.21
LP/J m 90993.0 0.0   1   0.0 0.0 90993.0, 90993.0 -0.15
MA/MyJ m 71543.0 0.0   1   0.0 0.0 71543.0, 71543.0 -0.48
NOD/ShiLtJ m 108694.0 0.0   1   0.0 0.0 108694.0, 108694.0 0.14
NON/ShiLtJ m 131184.0 0.0   1   0.0 0.0 131184.0, 131184.0 0.52
NZW/LacJ m 56490.0 0.0   1   0.0 0.0 56490.0, 56490.0 -0.73
PL/J m 128788.0 0.0   1   0.0 0.0 128788.0, 128788.0 0.48
RIIIS/J m 92686.0 0.0   1   0.0 0.0 92686.0, 92686.0 -0.13
SEA/GnJ m 87834.0 0.0   1   0.0 0.0 87834.0, 87834.0 -0.21
SJL/J m 88680.0 0.0   1   0.0 0.0 88680.0, 88680.0 -0.19
SM/J m 117677.0 0.0   1   0.0 0.0 117677.0, 117677.0 0.29
SWR/J m 143605.0 0.0   1   0.0 0.0 143605.0, 143605.0 0.72


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 58168.3 35904.3072 131134.6312 0.0
AXB19b/PgnJ m 140688.1 35904.3072 213654.4312 67721.7688
AXB24/PgnJ m 73339.25 35904.3072 146305.5812 372.9188
BALB/cJ m 91687.1333 29315.7441 151263.8933 32110.3734
BXA16/PgnJ m 53603.75 35904.3072 126570.0812 0.0
BXD19/TyJ m 113391.65 35904.3072 186357.9812 40425.3188
BXD28/TyJ m 75113.5 35904.3072 148079.8312 2147.1688
BXH4/TyJ m 98498.95 35904.3072 171465.2812 25532.6188
C3H/HeJ m 127974.2 35904.3072 200940.5312 55007.8688
C57BL/6J m 134552.82 22707.8777 180700.7798 88404.8602
CXB11/HiAJ m 142433.3 35904.3072 215399.6312 69466.9688
CXB12/HiAJ m 52283.35 35904.3072 125249.6812 0.0
CXB13/HiAJ m 135197.2 29315.7441 194773.9599 75620.4401
CXB1/ByJ m 93094.8667 29315.7441 152671.6266 33518.1067
CXB2/ByJ m 138099.3 29315.7441 197676.0599 78522.5401
CXB3/ByJ m 91303.3 35904.3072 164269.6312 18336.9688
CXB4/ByJ m 72257.4 35904.3072 145223.7312 0.0
CXB6/ByJ m 188468.3667 29315.7441 248045.1266 128891.6067
CXB7/ByJ m 67516.85 35904.3072 140483.1812 0.0
CXB8/HiAJ m 122958.0667 29315.7441 182534.8266 63381.3067
CXB9/HiAJ m 107960.1 29315.7441 167536.8599 48383.3401
DBA/2J m 115260.8 25388.1791 166855.7876 63665.8124




  GWAS USING LINEAR MIXED MODELS

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