Phenotype measure:   HMDPpheno8   nonadecanoate

ID, description, units MPD:50365   nonadecanoate   liver nonadecanoate (19:0) (16h fast), relative abundance  
Data set, strains HMDPpheno8   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

HMDPpheno8 - liver nonadecanoate (19:0) (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means229420   None
Median of the strain means219277   None
SD of the strain means± 70528
Coefficient of variation (CV)0.307
Min–max range of strain means86003   –   469932   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 275157929986.96 13102758570.8076 1.0227 0.465
Residuals 34 435592125134.579 12811533092.1935


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 257574.0 0.0   1   0.0 0.0 257574.0, 257574.0 0.4
A/J m 176571.0 28739.0   2   20322.0 0.163 156249.0, 196893.0 -0.75
AKR/J m 127854.0 0.0   1   0.0 0.0 127854.0, 127854.0 -1.44
AXB10/PgnJ m 181676.0 0.0   1   0.0 0.0 181676.0, 181676.0 -0.68
AXB12/PgnJ m 263560.0 0.0   1   0.0 0.0 263560.0, 263560.0 0.48
AXB13/PgnJ m 110966.0 0.0   1   0.0 0.0 110966.0, 110966.0 -1.68
AXB15/PgnJ m 206866.0 0.0   1   0.0 0.0 206866.0, 206866.0 -0.32
AXB19a/PgnJ m 179515.0 0.0   1   0.0 0.0 179515.0, 179515.0 -0.71
AXB19b/PgnJ m 217436.0 20857.0   2   14748.0 0.0959 202688.0, 232184.0 -0.17
AXB19/PgnJ m 260088.0 0.0   1   0.0 0.0 260088.0, 260088.0 0.43
AXB1/PgnJ m 215256.0 0.0   1   0.0 0.0 215256.0, 215256.0 -0.2
AXB23/PgnJ m 217788.0 0.0   1   0.0 0.0 217788.0, 217788.0 -0.16
AXB24/PgnJ m 312252.0 172973.0   2   122311.0 0.554 189941.0, 434562.0 1.17
AXB2/PgnJ m 309146.0 0.0   1   0.0 0.0 309146.0, 309146.0 1.13
AXB4/PgnJ m 175293.0 0.0   1   0.0 0.0 175293.0, 175293.0 -0.77
AXB5/PgnJ m 155268.0 0.0   1   0.0 0.0 155268.0, 155268.0 -1.05
AXB6/PgnJ m 289707.0 0.0   1   0.0 0.0 289707.0, 289707.0 0.85
AXB8/PgnJ m 159444.0 0.0   1   0.0 0.0 159444.0, 159444.0 -0.99
BALB/cJ m 233352.0 9147.0   3 5281.0 0.0392 225618.0, 243448.0 0.06
BTBR T+ Itpr3tf/J m 115259.0 0.0   1   0.0 0.0 115259.0, 115259.0 -1.62
BUB/BnJ m 283090.0 0.0   1   0.0 0.0 283090.0, 283090.0 0.76
BXA11/PgnJ m 196139.0 0.0   1   0.0 0.0 196139.0, 196139.0 -0.47
BXA12/PgnJ m 249207.0 0.0   1   0.0 0.0 249207.0, 249207.0 0.28
BXA13/PgnJ m 179598.0 0.0   1   0.0 0.0 179598.0, 179598.0 -0.71
BXA14/PgnJ m 187951.0 0.0   1   0.0 0.0 187951.0, 187951.0 -0.59
BXA16/PgnJ m 218604.0 21855.0   2   15454.0 0.1 203151.0, 234058.0 -0.15
BXA1/PgnJ m 359898.0 0.0   1   0.0 0.0 359898.0, 359898.0 1.85
BXA24/PgnJ m 220488.0 0.0   1   0.0 0.0 220488.0, 220488.0 -0.13
BXA25/PgnJ m 361618.0 0.0   1   0.0 0.0 361618.0, 361618.0 1.87
BXA26/PgnJ m 400719.0 0.0   1   0.0 0.0 400719.0, 400719.0 2.43
BXA2/PgnJ m 252220.0 0.0   1   0.0 0.0 252220.0, 252220.0 0.32
BXA4/PgnJ m 262160.0 0.0   1   0.0 0.0 262160.0, 262160.0 0.46
BXA7/PgnJ m 167837.0 0.0   1   0.0 0.0 167837.0, 167837.0 -0.87
BXA8/PgnJ m 187336.0 0.0   1   0.0 0.0 187336.0, 187336.0 -0.6
BXD11/TyJ m 145131.0 0.0   1   0.0 0.0 145131.0, 145131.0 -1.2
BXD12/TyJ m 297462.0 0.0   1   0.0 0.0 297462.0, 297462.0 0.96
BXD13/TyJ m 195703.0 0.0   1   0.0 0.0 195703.0, 195703.0 -0.48
BXD14/TyJ m 141829.0 0.0   1   0.0 0.0 141829.0, 141829.0 -1.24
BXD15/TyJ m 229716.0 0.0   1   0.0 0.0 229716.0, 229716.0 0.0
BXD18/TyJ m 188636.0 0.0   1   0.0 0.0 188636.0, 188636.0 -0.58
BXD19/TyJ m 216919.0 94048.0   2   66502.0 0.434 150417.0, 283421.0 -0.18
BXD1/TyJ m 219506.0 0.0   1   0.0 0.0 219506.0, 219506.0 -0.14
BXD20/TyJ m 230452.0 0.0   1   0.0 0.0 230452.0, 230452.0 0.01
BXD21/TyJ m 219597.0 0.0   1   0.0 0.0 219597.0, 219597.0 -0.14
BXD22/TyJ m 193288.0 0.0   1   0.0 0.0 193288.0, 193288.0 -0.51
BXD24/TyJ m 199284.0 0.0   1   0.0 0.0 199284.0, 199284.0 -0.43
BXD24/TyJ-Cep290rd16/J m 190375.0 0.0   1   0.0 0.0 190375.0, 190375.0 -0.55
BXD28/TyJ m 216075.0 56.1   2   39.6 0.00026 216036.0, 216115.0 -0.19
BXD29-Tlr4lps-2J/J m 219048.0 0.0   1   0.0 0.0 219048.0, 219048.0 -0.15
BXD2/TyJ m 192412.0 0.0   1   0.0 0.0 192412.0, 192412.0 -0.52
BXD32/TyJ m 257526.0 0.0   1   0.0 0.0 257526.0, 257526.0 0.4
BXD33/TyJ m 136454.0 0.0   1   0.0 0.0 136454.0, 136454.0 -1.32
BXD34/TyJ m 240679.0 0.0   1   0.0 0.0 240679.0, 240679.0 0.16
BXD36/TyJ m 248638.0 0.0   1   0.0 0.0 248638.0, 248638.0 0.27
BXD38/TyJ m 349753.0 0.0   1   0.0 0.0 349753.0, 349753.0 1.71
BXD39/TyJ m 154936.0 0.0   1   0.0 0.0 154936.0, 154936.0 -1.06
BXD40/TyJ m 238837.0 0.0   1   0.0 0.0 238837.0, 238837.0 0.13
BXD42/TyJ m 242864.0 0.0   1   0.0 0.0 242864.0, 242864.0 0.19
BXD5/TyJ m 260580.0 0.0   1   0.0 0.0 260580.0, 260580.0 0.44
BXD6/TyJ m 167455.0 0.0   1   0.0 0.0 167455.0, 167455.0 -0.88
BXD8/TyJ m 303200.0 0.0   1   0.0 0.0 303200.0, 303200.0 1.05
BXD9/TyJ m 211124.0 0.0   1   0.0 0.0 211124.0, 211124.0 -0.26
BXH10/TyJ m 162280.0 0.0   1   0.0 0.0 162280.0, 162280.0 -0.95
BXH19/TyJ m 90680.0 0.0   1   0.0 0.0 90680.0, 90680.0 -1.97
BXH20/KccJ m 180516.0 0.0   1   0.0 0.0 180516.0, 180516.0 -0.69
BXH22/KccJ m 223292.0 0.0   1   0.0 0.0 223292.0, 223292.0 -0.09
BXH2/TyJ m 139063.0 0.0   1   0.0 0.0 139063.0, 139063.0 -1.28
BXH4/TyJ m 194451.0 2051.0   2   1450.0 0.0105 193001.0, 195902.0 -0.5
BXH6/TyJ m 139209.0 0.0   1   0.0 0.0 139209.0, 139209.0 -1.28
BXH7/TyJ m 209157.0 0.0   1   0.0 0.0 209157.0, 209157.0 -0.29
BXH8/TyJ m 232847.0 0.0   1   0.0 0.0 232847.0, 232847.0 0.05
BXH9/TyJ m 169844.0 0.0   1   0.0 0.0 169844.0, 169844.0 -0.84
C3H/HeJ m 209620.0 63277.0   2   44744.0 0.302 164876.0, 254364.0 -0.28
C57BL/6J m 241121.0 63753.0   5 28511.0 0.264 167307.0, 337698.0 0.17
C57L/J m 368469.0 0.0   1   0.0 0.0 368469.0, 368469.0 1.97
C58/J m 225544.0 0.0   1   0.0 0.0 225544.0, 225544.0 -0.05
CAST/EiJ m 86003.0 0.0   1   0.0 0.0 86003.0, 86003.0 -2.03
CBA/J m 261834.0 0.0   1   0.0 0.0 261834.0, 261834.0 0.46
CE/J m 274828.0 0.0   1   0.0 0.0 274828.0, 274828.0 0.64
CXB11/HiAJ m 165705.0 31482.0   2   22261.0 0.19 143443.0, 187966.0 -0.9
CXB12/HiAJ m 353844.0 63541.0   2   44931.0 0.18 308913.0, 398774.0 1.76
CXB13/HiAJ m 254827.0 28562.0   3 16490.0 0.112 221849.0, 271617.0 0.36
CXB1/ByJ m 247319.0 126081.0   3 72793.0 0.51 113996.0, 364628.0 0.25
CXB2/ByJ m 331205.0 77525.0   3 44759.0 0.234 272388.0, 419055.0 1.44
CXB3/ByJ m 242556.0 25318.0   2   17903.0 0.104 224653.0, 260458.0 0.19
CXB4/ByJ m 206070.0 73649.0   2   52077.0 0.357 153992.0, 258147.0 -0.33
CXB6/ByJ m 224760.0 148176.0   3 85549.0 0.659 131956.0, 395648.0 -0.07
CXB7/ByJ m 190221.0 4678.0   2   3308.0 0.0246 186913.0, 193529.0 -0.56
CXB8/HiAJ m 342571.0 102956.0   3 59441.0 0.301 257856.0, 457160.0 1.6
CXB9/HiAJ m 469932.0 348855.0   3 201411.0 0.742 211518.0, 866751.0 3.41
DBA/2J m 266592.0 56521.0   4 28261.0 0.212 198694.0, 331395.0 0.53
FVB/NJ m 347707.0 0.0   1   0.0 0.0 347707.0, 347707.0 1.68
I/LnJ m 122314.0 0.0   1   0.0 0.0 122314.0, 122314.0 -1.52
KK/HlJ m 242336.0 0.0   1   0.0 0.0 242336.0, 242336.0 0.18
LG/J m 125509.0 0.0   1   0.0 0.0 125509.0, 125509.0 -1.47
LP/J m 191981.0 0.0   1   0.0 0.0 191981.0, 191981.0 -0.53
MA/MyJ m 365520.0 0.0   1   0.0 0.0 365520.0, 365520.0 1.93
NOD/ShiLtJ m 268337.0 0.0   1   0.0 0.0 268337.0, 268337.0 0.55
NON/ShiLtJ m 173424.0 0.0   1   0.0 0.0 173424.0, 173424.0 -0.79
NZW/LacJ m 322514.0 0.0   1   0.0 0.0 322514.0, 322514.0 1.32
PL/J m 319861.0 0.0   1   0.0 0.0 319861.0, 319861.0 1.28
RIIIS/J m 212957.0 0.0   1   0.0 0.0 212957.0, 212957.0 -0.23
SEA/GnJ m 279986.0 0.0   1   0.0 0.0 279986.0, 279986.0 0.72
SJL/J m 202410.0 0.0   1   0.0 0.0 202410.0, 202410.0 -0.38
SM/J m 335410.0 0.0   1   0.0 0.0 335410.0, 335410.0 1.5
SWR/J m 304727.0 0.0   1   0.0 0.0 304727.0, 304727.0 1.07


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 176570.9 80036.0328 339223.6882 13918.1118
AXB19b/PgnJ m 217435.85 80036.0328 380088.6382 54783.0618
AXB24/PgnJ m 312251.65 80036.0328 474904.4382 149598.8618
BALB/cJ m 233351.6333 65349.1471 366157.0788 100546.1879
BXA16/PgnJ m 218604.4 80036.0328 381257.1882 55951.6118
BXD19/TyJ m 216919.0 80036.0328 379571.7882 54266.2118
BXD28/TyJ m 216075.45 80036.0328 378728.2382 53422.6618
BXH4/TyJ m 194451.4 80036.0328 357104.1882 31798.6118
C3H/HeJ m 209620.15 80036.0328 372272.9382 46967.3618
C57BL/6J m 241120.58 50619.2317 343991.2357 138249.9243
CXB11/HiAJ m 165704.65 80036.0328 328357.4382 3051.8618
CXB12/HiAJ m 353843.8 80036.0328 516496.5882 191191.0118
CXB13/HiAJ m 254827.4333 65349.1471 387632.8788 122021.9879
CXB1/ByJ m 247319.1333 65349.1471 380124.5788 114513.6879
CXB2/ByJ m 331204.6667 65349.1471 464010.1121 198399.2212
CXB3/ByJ m 242555.75 80036.0328 405208.5382 79902.9618
CXB4/ByJ m 206069.5 80036.0328 368722.2882 43416.7118
CXB6/ByJ m 224760.3 65349.1471 357565.7454 91954.8546
CXB7/ByJ m 190221.0 80036.0328 352873.7882 27568.2118
CXB8/HiAJ m 342571.4 65349.1471 475376.8454 209765.9546
CXB9/HiAJ m 469931.9667 65349.1471 602737.4121 337126.5212
DBA/2J m 266591.675 56594.0215 381604.5645 151578.7855




  GWAS USING LINEAR MIXED MODELS