Project measure / variable:   HMDPpheno8   nonadecanoate

ID, description, units MPD:50365   nonadecanoate   liver nonadecanoate (19:0) (16h fast), relative abundance    
Data set, strains HMDPpheno8   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


  STRAIN COMPARISON PLOT
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HMDPpheno8 - liver nonadecanoate (19:0) (16h fast), relative abundance

CXB9/HiAJBXA26/PgnJC57L/JMA/MyJBXA25/PgnJBXA1/PgnJCXB12/HiAJBXD38/TyJFVB/NJCXB8/HiAJSM/JCXB2/ByJNZW/LacJPL/JAXB24/PgnJAXB2/PgnJSWR/JBXD8/TyJBXD12/TyJAXB6/PgnJBUB/BnJSEA/GnJCE/JNOD/ShiLtJDBA/2JAXB12/PgnJBXA4/PgnJCBA/JBXD5/TyJAXB19/PgnJ129X1/SvJBXD32/TyJCXB13/HiAJBXA2/PgnJBXA12/PgnJBXD36/TyJCXB1/ByJBXD42/TyJCXB3/ByJKK/HlJC57BL/6JBXD34/TyJBXD40/TyJBALB/cJBXH8/TyJBXD20/TyJBXD15/TyJC58/JCXB6/ByJBXH22/KccJBXA24/PgnJBXD21/TyJBXD1/TyJBXD29-Tlr4<lps-2J>/JBXA16/PgnJAXB23/PgnJAXB19b/PgnJBXD19/TyJBXD28/TyJAXB1/PgnJRIIIS/JBXD9/TyJC3H/HeJBXH7/TyJAXB15/PgnJCXB4/ByJSJL/JBXD24/TyJBXA11/PgnJBXD13/TyJBXH4/TyJBXD22/TyJBXD2/TyJLP/JBXD24/TyJ-Cep290<rd16>/JCXB7/ByJBXD18/TyJBXA14/PgnJBXA8/PgnJAXB10/PgnJBXH20/KccJBXA13/PgnJAXB19a/PgnJA/JAXB4/PgnJNON/ShiLtJBXH9/TyJBXA7/PgnJBXD6/TyJCXB11/HiAJBXH10/TyJAXB8/PgnJAXB5/PgnJBXD39/TyJBXD11/TyJBXD14/TyJBXH6/TyJBXH2/TyJBXD33/TyJAKR/JLG/JI/LnJBTBR T<+> Itpr3<tf>/JAXB13/PgnJBXH19/TyJCAST/EiJ (no units) 100,000200,000300,000400,000500,000600,000700,000800,000900,000femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means229420   None
Median of the strain means219277   None
SD of the strain means± 70528
Coefficient of variation (CV)0.307
Min–max range of strain means86003   –   469932   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 275157929986.96 13102758570.8076 1.0227 0.465
Residuals 34 435592125134.579 12811533092.1935


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 106 (106)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129X1/SvJ m 257574.0 0.0   1   0.0 0.0 257574.0, 257574.0 0.4
A/J m 176571.0 28739.0   2   20322.0 0.163 156249.0, 196893.0 -0.75
AKR/J m 127854.0 0.0   1   0.0 0.0 127854.0, 127854.0 -1.44
AXB10/PgnJ m 181676.0 0.0   1   0.0 0.0 181676.0, 181676.0 -0.68
AXB12/PgnJ m 263560.0 0.0   1   0.0 0.0 263560.0, 263560.0 0.48
AXB13/PgnJ m 110966.0 0.0   1   0.0 0.0 110966.0, 110966.0 -1.68
AXB15/PgnJ m 206866.0 0.0   1   0.0 0.0 206866.0, 206866.0 -0.32
AXB19a/PgnJ m 179515.0 0.0   1   0.0 0.0 179515.0, 179515.0 -0.71
AXB19b/PgnJ m 217436.0 20857.0   2   14748.0 0.0959 202688.0, 232184.0 -0.17
AXB19/PgnJ m 260088.0 0.0   1   0.0 0.0 260088.0, 260088.0 0.43
AXB1/PgnJ m 215256.0 0.0   1   0.0 0.0 215256.0, 215256.0 -0.2
AXB23/PgnJ m 217788.0 0.0   1   0.0 0.0 217788.0, 217788.0 -0.16
AXB24/PgnJ m 312252.0 172973.0   2   122311.0 0.554 189941.0, 434562.0 1.17
AXB2/PgnJ m 309146.0 0.0   1   0.0 0.0 309146.0, 309146.0 1.13
AXB4/PgnJ m 175293.0 0.0   1   0.0 0.0 175293.0, 175293.0 -0.77
AXB5/PgnJ m 155268.0 0.0   1   0.0 0.0 155268.0, 155268.0 -1.05
AXB6/PgnJ m 289707.0 0.0   1   0.0 0.0 289707.0, 289707.0 0.85
AXB8/PgnJ m 159444.0 0.0   1   0.0 0.0 159444.0, 159444.0 -0.99
BALB/cJ m 233352.0 9147.0   3 5281.0 0.0392 225618.0, 243448.0 0.06
BTBR T+ Itpr3tf/J m 115259.0 0.0   1   0.0 0.0 115259.0, 115259.0 -1.62
BUB/BnJ m 283090.0 0.0   1   0.0 0.0 283090.0, 283090.0 0.76
BXA11/PgnJ m 196139.0 0.0   1   0.0 0.0 196139.0, 196139.0 -0.47
BXA12/PgnJ m 249207.0 0.0   1   0.0 0.0 249207.0, 249207.0 0.28
BXA13/PgnJ m 179598.0 0.0   1   0.0 0.0 179598.0, 179598.0 -0.71
BXA14/PgnJ m 187951.0 0.0   1   0.0 0.0 187951.0, 187951.0 -0.59
BXA16/PgnJ m 218604.0 21855.0   2   15454.0 0.1 203151.0, 234058.0 -0.15
BXA1/PgnJ m 359898.0 0.0   1   0.0 0.0 359898.0, 359898.0 1.85
BXA24/PgnJ m 220488.0 0.0   1   0.0 0.0 220488.0, 220488.0 -0.13
BXA25/PgnJ m 361618.0 0.0   1   0.0 0.0 361618.0, 361618.0 1.87
BXA26/PgnJ m 400719.0 0.0   1   0.0 0.0 400719.0, 400719.0 2.43
BXA2/PgnJ m 252220.0 0.0   1   0.0 0.0 252220.0, 252220.0 0.32
BXA4/PgnJ m 262160.0 0.0   1   0.0 0.0 262160.0, 262160.0 0.46
BXA7/PgnJ m 167837.0 0.0   1   0.0 0.0 167837.0, 167837.0 -0.87
BXA8/PgnJ m 187336.0 0.0   1   0.0 0.0 187336.0, 187336.0 -0.6
BXD11/TyJ m 145131.0 0.0   1   0.0 0.0 145131.0, 145131.0 -1.2
BXD12/TyJ m 297462.0 0.0   1   0.0 0.0 297462.0, 297462.0 0.96
BXD13/TyJ m 195703.0 0.0   1   0.0 0.0 195703.0, 195703.0 -0.48
BXD14/TyJ m 141829.0 0.0   1   0.0 0.0 141829.0, 141829.0 -1.24
BXD15/TyJ m 229716.0 0.0   1   0.0 0.0 229716.0, 229716.0 0.0
BXD18/TyJ m 188636.0 0.0   1   0.0 0.0 188636.0, 188636.0 -0.58
BXD19/TyJ m 216919.0 94048.0   2   66502.0 0.434 150417.0, 283421.0 -0.18
BXD1/TyJ m 219506.0 0.0   1   0.0 0.0 219506.0, 219506.0 -0.14
BXD20/TyJ m 230452.0 0.0   1   0.0 0.0 230452.0, 230452.0 0.01
BXD21/TyJ m 219597.0 0.0   1   0.0 0.0 219597.0, 219597.0 -0.14
BXD22/TyJ m 193288.0 0.0   1   0.0 0.0 193288.0, 193288.0 -0.51
BXD24/TyJ m 199284.0 0.0   1   0.0 0.0 199284.0, 199284.0 -0.43
BXD24/TyJ-Cep290rd16/J m 190375.0 0.0   1   0.0 0.0 190375.0, 190375.0 -0.55
BXD28/TyJ m 216075.0 56.1   2   39.6 0.00026 216036.0, 216115.0 -0.19
BXD29-Tlr4lps-2J/J m 219048.0 0.0   1   0.0 0.0 219048.0, 219048.0 -0.15
BXD2/TyJ m 192412.0 0.0   1   0.0 0.0 192412.0, 192412.0 -0.52
BXD32/TyJ m 257526.0 0.0   1   0.0 0.0 257526.0, 257526.0 0.4
BXD33/TyJ m 136454.0 0.0   1   0.0 0.0 136454.0, 136454.0 -1.32
BXD34/TyJ m 240679.0 0.0   1   0.0 0.0 240679.0, 240679.0 0.16
BXD36/TyJ m 248638.0 0.0   1   0.0 0.0 248638.0, 248638.0 0.27
BXD38/TyJ m 349753.0 0.0   1   0.0 0.0 349753.0, 349753.0 1.71
BXD39/TyJ m 154936.0 0.0   1   0.0 0.0 154936.0, 154936.0 -1.06
BXD40/TyJ m 238837.0 0.0   1   0.0 0.0 238837.0, 238837.0 0.13
BXD42/TyJ m 242864.0 0.0   1   0.0 0.0 242864.0, 242864.0 0.19
BXD5/TyJ m 260580.0 0.0   1   0.0 0.0 260580.0, 260580.0 0.44
BXD6/TyJ m 167455.0 0.0   1   0.0 0.0 167455.0, 167455.0 -0.88
BXD8/TyJ m 303200.0 0.0   1   0.0 0.0 303200.0, 303200.0 1.05
BXD9/TyJ m 211124.0 0.0   1   0.0 0.0 211124.0, 211124.0 -0.26
BXH10/TyJ m 162280.0 0.0   1   0.0 0.0 162280.0, 162280.0 -0.95
BXH19/TyJ m 90680.0 0.0   1   0.0 0.0 90680.0, 90680.0 -1.97
BXH20/KccJ m 180516.0 0.0   1   0.0 0.0 180516.0, 180516.0 -0.69
BXH22/KccJ m 223292.0 0.0   1   0.0 0.0 223292.0, 223292.0 -0.09
BXH2/TyJ m 139063.0 0.0   1   0.0 0.0 139063.0, 139063.0 -1.28
BXH4/TyJ m 194451.0 2051.0   2   1450.0 0.0105 193001.0, 195902.0 -0.5
BXH6/TyJ m 139209.0 0.0   1   0.0 0.0 139209.0, 139209.0 -1.28
BXH7/TyJ m 209157.0 0.0   1   0.0 0.0 209157.0, 209157.0 -0.29
BXH8/TyJ m 232847.0 0.0   1   0.0 0.0 232847.0, 232847.0 0.05
BXH9/TyJ m 169844.0 0.0   1   0.0 0.0 169844.0, 169844.0 -0.84
C3H/HeJ m 209620.0 63277.0   2   44744.0 0.302 164876.0, 254364.0 -0.28
C57BL/6J m 241121.0 63753.0   5 28511.0 0.264 167307.0, 337698.0 0.17
C57L/J m 368469.0 0.0   1   0.0 0.0 368469.0, 368469.0 1.97
C58/J m 225544.0 0.0   1   0.0 0.0 225544.0, 225544.0 -0.05
CAST/EiJ m 86003.0 0.0   1   0.0 0.0 86003.0, 86003.0 -2.03
CBA/J m 261834.0 0.0   1   0.0 0.0 261834.0, 261834.0 0.46
CE/J m 274828.0 0.0   1   0.0 0.0 274828.0, 274828.0 0.64
CXB11/HiAJ m 165705.0 31482.0   2   22261.0 0.19 143443.0, 187966.0 -0.9
CXB12/HiAJ m 353844.0 63541.0   2   44931.0 0.18 308913.0, 398774.0 1.76
CXB13/HiAJ m 254827.0 28562.0   3 16490.0 0.112 221849.0, 271617.0 0.36
CXB1/ByJ m 247319.0 126081.0   3 72793.0 0.51 113996.0, 364628.0 0.25
CXB2/ByJ m 331205.0 77525.0   3 44759.0 0.234 272388.0, 419055.0 1.44
CXB3/ByJ m 242556.0 25318.0   2   17903.0 0.104 224653.0, 260458.0 0.19
CXB4/ByJ m 206070.0 73649.0   2   52077.0 0.357 153992.0, 258147.0 -0.33
CXB6/ByJ m 224760.0 148176.0   3 85549.0 0.659 131956.0, 395648.0 -0.07
CXB7/ByJ m 190221.0 4678.0   2   3308.0 0.0246 186913.0, 193529.0 -0.56
CXB8/HiAJ m 342571.0 102956.0   3 59441.0 0.301 257856.0, 457160.0 1.6
CXB9/HiAJ m 469932.0 348855.0   3 201411.0 0.742 211518.0, 866751.0 3.41
DBA/2J m 266592.0 56521.0   4 28261.0 0.212 198694.0, 331395.0 0.53
FVB/NJ m 347707.0 0.0   1   0.0 0.0 347707.0, 347707.0 1.68
I/LnJ m 122314.0 0.0   1   0.0 0.0 122314.0, 122314.0 -1.52
KK/HlJ m 242336.0 0.0   1   0.0 0.0 242336.0, 242336.0 0.18
LG/J m 125509.0 0.0   1   0.0 0.0 125509.0, 125509.0 -1.47
LP/J m 191981.0 0.0   1   0.0 0.0 191981.0, 191981.0 -0.53
MA/MyJ m 365520.0 0.0   1   0.0 0.0 365520.0, 365520.0 1.93
NOD/ShiLtJ m 268337.0 0.0   1   0.0 0.0 268337.0, 268337.0 0.55
NON/ShiLtJ m 173424.0 0.0   1   0.0 0.0 173424.0, 173424.0 -0.79
NZW/LacJ m 322514.0 0.0   1   0.0 0.0 322514.0, 322514.0 1.32
PL/J m 319861.0 0.0   1   0.0 0.0 319861.0, 319861.0 1.28
RIIIS/J m 212957.0 0.0   1   0.0 0.0 212957.0, 212957.0 -0.23
SEA/GnJ m 279986.0 0.0   1   0.0 0.0 279986.0, 279986.0 0.72
SJL/J m 202410.0 0.0   1   0.0 0.0 202410.0, 202410.0 -0.38
SM/J m 335410.0 0.0   1   0.0 0.0 335410.0, 335410.0 1.5
SWR/J m 304727.0 0.0   1   0.0 0.0 304727.0, 304727.0 1.07


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 176570.9 80036.0328 339223.6882 13918.1118
AXB19b/PgnJ m 217435.85 80036.0328 380088.6382 54783.0618
AXB24/PgnJ m 312251.65 80036.0328 474904.4382 149598.8618
BALB/cJ m 233351.6333 65349.1471 366157.0788 100546.1879
BXA16/PgnJ m 218604.4 80036.0328 381257.1882 55951.6118
BXD19/TyJ m 216919.0 80036.0328 379571.7882 54266.2118
BXD28/TyJ m 216075.45 80036.0328 378728.2382 53422.6618
BXH4/TyJ m 194451.4 80036.0328 357104.1882 31798.6118
C3H/HeJ m 209620.15 80036.0328 372272.9382 46967.3618
C57BL/6J m 241120.58 50619.2317 343991.2357 138249.9243
CXB11/HiAJ m 165704.65 80036.0328 328357.4382 3051.8618
CXB12/HiAJ m 353843.8 80036.0328 516496.5882 191191.0118
CXB13/HiAJ m 254827.4333 65349.1471 387632.8788 122021.9879
CXB1/ByJ m 247319.1333 65349.1471 380124.5788 114513.6879
CXB2/ByJ m 331204.6667 65349.1471 464010.1121 198399.2212
CXB3/ByJ m 242555.75 80036.0328 405208.5382 79902.9618
CXB4/ByJ m 206069.5 80036.0328 368722.2882 43416.7118
CXB6/ByJ m 224760.3 65349.1471 357565.7454 91954.8546
CXB7/ByJ m 190221.0 80036.0328 352873.7882 27568.2118
CXB8/HiAJ m 342571.4 65349.1471 475376.8454 209765.9546
CXB9/HiAJ m 469931.9667 65349.1471 602737.4121 337126.5212
DBA/2J m 266591.675 56594.0215 381604.5645 151578.7855




  GWAS USING LINEAR MIXED MODELS

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